Analysis of interatomic Contacts of Structural Units in PDB entry:
7QLR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QLR entry

There are 3 chains in PDB entry 7QLR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ILE 616
B	GLN 14	ILE 616
C	GLY 15	PHE 91

There are182 helices in PDB entry 7QLR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	31	Right-handed alpha
Helix 2	AA2	A	32	40	Right-handed 310
Helix 3	AA3	A	41	52	Right-handed alpha
Helix 4	AA4	A	53	58	Right-handed alpha
Helix 5	AA5	A	61	69	Right-handed alpha
Helix 6	AA6	A	70	81	Right-handed alpha
Helix 7	AA7	A	83	92	Right-handed alpha
Helix 8	AA8	A	101	108	Right-handed alpha
Helix 9	AA9	A	110	116	Right-handed alpha
Helix 10	AB1	A	118	136	Right-handed alpha
Helix 11	AB2	A	137	146	Right-handed alpha
Helix 12	AB3	A	150	155	Right-handed alpha
Helix 13	AB4	A	158	165	Right-handed alpha
Helix 14	AB5	A	165	174	Right-handed alpha
Helix 15	AB6	A	175	184	Right-handed alpha
Helix 16	AB7	A	185	195	Right-handed alpha
Helix 17	AB8	A	195	210	Right-handed alpha
Helix 18	AB9	A	212	221	Right-handed alpha
Helix 19	AC1	A	222	231	Right-handed alpha
Helix 20	AC2	A	232	242	Right-handed alpha
Helix 21	AC3	A	242	251	Right-handed alpha
Helix 22	AC4	A	252	260	Right-handed alpha
Helix 23	AC5	A	262	271	Right-handed alpha
Helix 24	AC6	A	272	278	Right-handed alpha
Helix 25	AC7	A	278	313	Right-handed alpha
Helix 26	AC8	A	324	357	Right-handed alpha
Helix 27	AC9	A	358	367	Right-handed alpha
Helix 28	AD1	A	368	378	Right-handed alpha
Helix 29	AD2	A	380	387	Right-handed alpha
Helix 30	AD3	A	388	397	Right-handed alpha
Helix 31	AD4	A	398	406	Right-handed alpha
Helix 32	AD5	A	408	418	Right-handed alpha
Helix 33	AD6	A	418	427	Right-handed alpha
Helix 34	AD7	A	428	437	Right-handed alpha
Helix 35	AD8	A	438	447	Right-handed alpha
Helix 36	AD9	A	448	457	Right-handed alpha
Helix 37	AE1	A	458	467	Right-handed alpha
Helix 38	AE2	A	468	476	Right-handed alpha
Helix 39	AE3	A	478	487	Right-handed alpha
Helix 40	AE4	A	488	498	Right-handed alpha
Helix 41	AE5	A	498	508	Right-handed alpha
Helix 42	AE6	A	508	515	Right-handed alpha
Helix 43	AE7	A	515	526	Right-handed alpha
Helix 44	AE8	A	561	563	Right-handed 310
Helix 45	AE9	A	587	589	Right-handed 310
Helix 46	AF1	B	17	31	Right-handed alpha
Helix 47	AF2	B	32	40	Right-handed 310
Helix 48	AF3	B	41	52	Right-handed alpha
Helix 49	AF4	B	53	58	Right-handed alpha
Helix 50	AF5	B	61	69	Right-handed alpha
Helix 51	AF6	B	70	81	Right-handed alpha
Helix 52	AF7	B	83	92	Right-handed alpha
Helix 53	AF8	B	101	108	Right-handed alpha
Helix 54	AF9	B	110	116	Right-handed alpha
Helix 55	AG1	B	118	136	Right-handed alpha
Helix 56	AG2	B	137	146	Right-handed alpha
Helix 57	AG3	B	150	155	Right-handed alpha
Helix 58	AG4	B	158	165	Right-handed alpha
Helix 59	AG5	B	165	174	Right-handed alpha
Helix 60	AG6	B	175	184	Right-handed alpha
Helix 61	AG7	B	185	195	Right-handed alpha
Helix 62	AG8	B	195	210	Right-handed alpha
Helix 63	AG9	B	212	221	Right-handed alpha
Helix 64	AH1	B	222	231	Right-handed alpha
Helix 65	AH2	B	232	242	Right-handed alpha
Helix 66	AH3	B	242	251	Right-handed alpha
Helix 67	AH4	B	252	260	Right-handed alpha
Helix 68	AH5	B	262	271	Right-handed alpha
Helix 69	AH6	B	272	278	Right-handed alpha
Helix 70	AH7	B	278	313	Right-handed alpha
Helix 71	AH8	B	324	357	Right-handed alpha
Helix 72	AH9	B	358	367	Right-handed alpha
Helix 73	AI1	B	368	378	Right-handed alpha
Helix 74	AI2	B	380	387	Right-handed alpha
Helix 75	AI3	B	388	397	Right-handed alpha
Helix 76	AI4	B	398	406	Right-handed alpha
Helix 77	AI5	B	408	418	Right-handed alpha
Helix 78	AI6	B	418	427	Right-handed alpha
Helix 79	AI7	B	428	437	Right-handed alpha
Helix 80	AI8	B	438	447	Right-handed alpha
Helix 81	AI9	B	448	457	Right-handed alpha
Helix 82	AJ1	B	458	467	Right-handed alpha
Helix 83	AJ2	B	468	476	Right-handed alpha
Helix 84	AJ3	B	478	487	Right-handed alpha
Helix 85	AJ4	B	488	498	Right-handed alpha
Helix 86	AJ5	B	498	508	Right-handed alpha
Helix 87	AJ6	B	508	515	Right-handed alpha
Helix 88	AJ7	B	515	526	Right-handed alpha
Helix 89	AJ8	B	561	563	Right-handed 310
Helix 90	AJ9	B	587	589	Right-handed 310
Helix 91	AK1	C	17	31	Right-handed alpha
Helix 92	AK2	C	32	40	Right-handed 310
Helix 93	AK3	C	41	52	Right-handed alpha
Helix 94	AK4	C	53	58	Right-handed alpha
Helix 95	AK5	C	61	69	Right-handed alpha
Helix 96	AK6	C	70	81	Right-handed alpha
Helix 97	AK7	C	83	92	Right-handed alpha
Helix 98	AK8	C	101	108	Right-handed alpha
Helix 99	AK9	C	110	116	Right-handed alpha
Helix 100	AL1	C	118	135	Right-handed alpha
Helix 101	AL2	C	137	146	Right-handed alpha
Helix 102	AL3	C	150	155	Right-handed alpha
Helix 103	AL4	C	158	165	Right-handed alpha
Helix 104	AL5	C	165	174	Right-handed alpha
Helix 105	AL6	C	175	184	Right-handed alpha
Helix 106	AL7	C	185	195	Right-handed alpha
Helix 107	AL8	C	197	205	Right-handed alpha
Helix 108	AL9	C	205	210	Right-handed alpha
Helix 109	AM1	C	212	221	Right-handed alpha
Helix 110	AM2	C	222	231	Right-handed alpha
Helix 111	AM3	C	232	242	Right-handed alpha
Helix 112	AM4	C	242	251	Right-handed alpha
Helix 113	AM5	C	252	260	Right-handed alpha
Helix 114	AM6	C	262	271	Right-handed alpha
Helix 115	AM7	C	272	278	Right-handed alpha
Helix 116	AM8	C	278	313	Right-handed alpha
Helix 117	AM9	C	324	357	Right-handed alpha
Helix 118	AN1	C	358	367	Right-handed alpha
Helix 119	AN2	C	368	378	Right-handed alpha
Helix 120	AN3	C	380	387	Right-handed alpha
Helix 121	AN4	C	388	397	Right-handed alpha
Helix 122	AN5	C	398	406	Right-handed alpha
Helix 123	AN6	C	408	418	Right-handed alpha
Helix 124	AN7	C	418	426	Right-handed alpha
Helix 125	AN8	C	428	437	Right-handed alpha
Helix 126	AN9	C	438	447	Right-handed alpha
Helix 127	AO1	C	448	457	Right-handed alpha
Helix 128	AO2	C	458	467	Right-handed alpha
Helix 129	AO3	C	468	476	Right-handed alpha
Helix 130	AO4	C	478	487	Right-handed alpha
Helix 131	AO5	C	488	498	Right-handed alpha
Helix 132	AO6	C	498	508	Right-handed alpha
Helix 133	AO7	C	508	515	Right-handed alpha
Helix 134	AO8	C	515	526	Right-handed alpha
Helix 135	AO9	C	561	563	Right-handed 310
Helix 136	AP1	C	587	589	Right-handed 310
Helix 137	AP2	D	17	31	Right-handed alpha
Helix 138	AP3	D	32	40	Right-handed 310
Helix 139	AP4	D	41	52	Right-handed alpha
Helix 140	AP5	D	53	58	Right-handed alpha
Helix 141	AP6	D	61	69	Right-handed alpha
Helix 142	AP7	D	70	81	Right-handed alpha
Helix 143	AP8	D	83	92	Right-handed alpha
Helix 144	AP9	D	101	108	Right-handed alpha
Helix 145	AQ1	D	110	116	Right-handed alpha
Helix 146	AQ2	D	118	135	Right-handed alpha
Helix 147	AQ3	D	137	146	Right-handed alpha
Helix 148	AQ4	D	150	155	Right-handed alpha
Helix 149	AQ5	D	158	165	Right-handed alpha
Helix 150	AQ6	D	165	174	Right-handed alpha
Helix 151	AQ7	D	175	184	Right-handed alpha
Helix 152	AQ8	D	185	195	Right-handed alpha
Helix 153	AQ9	D	197	205	Right-handed alpha
Helix 154	AR1	D	205	210	Right-handed alpha
Helix 155	AR2	D	212	221	Right-handed alpha
Helix 156	AR3	D	222	231	Right-handed alpha
Helix 157	AR4	D	232	241	Right-handed alpha
Helix 158	AR5	D	242	251	Right-handed alpha
Helix 159	AR6	D	252	260	Right-handed alpha
Helix 160	AR7	D	262	271	Right-handed alpha
Helix 161	AR8	D	272	278	Right-handed alpha
Helix 162	AR9	D	278	313	Right-handed alpha
Helix 163	AS1	D	324	357	Right-handed alpha
Helix 164	AS2	D	358	367	Right-handed alpha
Helix 165	AS3	D	368	378	Right-handed alpha
Helix 166	AS4	D	380	387	Right-handed alpha
Helix 167	AS5	D	388	397	Right-handed alpha
Helix 168	AS6	D	398	406	Right-handed alpha
Helix 169	AS7	D	408	418	Right-handed alpha
Helix 170	AS8	D	418	427	Right-handed alpha
Helix 171	AS9	D	428	437	Right-handed alpha
Helix 172	AT1	D	438	447	Right-handed alpha
Helix 173	AT2	D	448	457	Right-handed alpha
Helix 174	AT3	D	458	467	Right-handed alpha
Helix 175	AT4	D	468	476	Right-handed alpha
Helix 176	AT5	D	478	488	Right-handed alpha
Helix 177	AT6	D	488	498	Right-handed alpha
Helix 178	AT7	D	498	508	Right-handed alpha
Helix 179	AT8	D	508	515	Right-handed alpha
Helix 180	AT9	D	515	526	Right-handed alpha
Helix 181	AU1	D	561	563	Right-handed 310
Helix 182	AU2	D	587	589	Right-handed 310

There are 8 sheets in PDB entry 7QLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	316	first strand
Strand 2	A	319	320	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	539	first strand
Strand 2	A	606	615	anti-parallel
Strand 3	A	546	559	anti-parallel
Strand 4	A	591	603	anti-parallel
Strand 5	A	566	571	anti-parallel
Strand 6	A	578	582	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	316	first strand
Strand 2	B	319	320	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	539	first strand
Strand 2	B	606	615	anti-parallel
Strand 3	B	546	559	anti-parallel
Strand 4	B	591	603	anti-parallel
Strand 5	B	566	571	anti-parallel
Strand 6	B	578	582	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	315	316	first strand
Strand 2	C	319	320	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	530	539	first strand
Strand 2	C	606	615	anti-parallel
Strand 3	C	546	559	anti-parallel
Strand 4	C	591	603	anti-parallel
Strand 5	C	566	571	anti-parallel
Strand 6	C	578	582	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	315	316	first strand
Strand 2	D	319	320	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	539	first strand
Strand 2	D	606	615	anti-parallel
Strand 3	D	546	559	anti-parallel
Strand 4	D	591	603	anti-parallel
Strand 5	D	566	571	anti-parallel
Strand 6	D	578	582	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QLR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QLR