Analysis of interatomic Contacts of Structural Units in PDB entry:
7QNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QNO entry

There is 1 chain in PDB entry 7QNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 55VAL 700
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 7QNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 73Right-handed 310
Helix 2
AA2
A
86 99Right-handed alpha
Helix 3
AA3
A
101 105Right-handed 310
Helix 4
AA4
A
114 119Right-handed alpha
Helix 5
AA5
A
123 133Right-handed alpha
Helix 6
AA6
A
134 136Right-handed 310
Helix 7
AA7
A
137 146Right-handed alpha
Helix 8
AA8
A
156 177Right-handed alpha
Helix 9
AA9
A
206 220Right-handed alpha
Helix 10
AB1
A
234 241Right-handed alpha
Helix 11
AB2
A
264 268Right-handed 310
Helix 12
AB3
A
274 278Right-handed 310
Helix 13
AB4
A
292 303Right-handed alpha
Helix 14
AB5
A
303 312Right-handed alpha
Helix 15
AB6
A
337 348Right-handed alpha
Helix 16
AB7
A
349 353Right-handed 310
Helix 17
AB8
A
364 380Right-handed alpha
Helix 18
AB9
A
394 409Right-handed alpha
Helix 19
AC1
A
410 412Right-handed 310
Helix 20
AC2
A
414 418Right-handed 310
Helix 21
AC3
A
449 454Right-handed 310
Helix 22
AC4
A
467 480Right-handed alpha
Helix 23
AC5
A
481 486Right-handed alpha
Helix 24
AC6
A
495 500Right-handed alpha
Helix 25
AC7
A
504 514Right-handed alpha
Helix 26
AC8
A
518 528Right-handed alpha
Helix 27
AC9
A
537 558Right-handed alpha
Helix 28
AD1
A
587 600Right-handed alpha
Helix 29
AD2
A
616 623Right-handed alpha
Helix 30
AD3
A
638 641Right-handed 310
Helix 31
AD4
A
646 650Right-handed 310
Helix 32
AD5
A
656 660Right-handed 310
Helix 33
AD6
A
674 685Right-handed alpha
Helix 34
AD7
A
685 694Right-handed alpha
Helix 35
AD8
A
703 707Right-handed 310
Helix 36
AD9
A
718 730Right-handed alpha
Helix 37
AE1
A
731 735Right-handed 310
Helix 38
AE2
A
746 762Right-handed alpha
Helix 39
AE3
A
776 791Right-handed alpha
Helix 40
AE4
A
794 798Right-handed 310
Helix 41
AE5
A
802 808Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7QNO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
63 66parallel
Strand 3
A
182 185parallel
Strand 4
A
355 359parallel
Strand 5
A
315 320parallel
Strand 6
A
224 228parallel
Strand 7
A
247 254parallel
Strand 8
A
281 286parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 488first strand
Strand 2
A
444 447parallel
Strand 3
A
563 566parallel
Strand 4
A
737 741parallel
Strand 5
A
697 702parallel
Strand 6
A
606 610parallel
Strand 7
A
629 636parallel
Strand 8
A
663 668parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il