Analysis of interatomic Contacts of Structural Units in PDB entry:
7QO7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QO7 entry

There are 3 chains in PDB entry 7QO7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 19	SER 1144
B	THR 19	SER 1144
C	THR 19	SER 1144

There are 64 helices in PDB entry 7QO7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	69	73	Right-handed 310
Helix 2	AA2	A	149	153	Right-handed 310
Helix 3	AA3	A	291	301	Right-handed alpha
Helix 4	AA4	A	361	368	Right-handed alpha
Helix 5	AA5	A	380	385	Right-handed alpha
Helix 6	AA6	A	403	408	Right-handed alpha
Helix 7	AA7	A	413	419	Right-handed alpha
Helix 8	AA8	A	435	440	Right-handed alpha
Helix 9	AA9	A	495	499	Right-handed 310
Helix 10	AB1	A	734	740	Right-handed alpha
Helix 11	AB2	A	743	751	Right-handed alpha
Helix 12	AB3	A	752	754	Right-handed 310
Helix 13	AB4	A	757	780	Right-handed alpha
Helix 14	AB5	A	813	824	Right-handed alpha
Helix 15	AB6	A	825	827	Right-handed 310
Helix 16	AB7	A	863	881	Right-handed alpha
Helix 17	AB8	A	883	888	Right-handed 310
Helix 18	AB9	A	894	905	Right-handed alpha
Helix 19	AC1	A	909	937	Right-handed alpha
Helix 20	AC2	A	942	962	Right-handed alpha
Helix 21	AC3	A	963	965	Right-handed 310
Helix 22	AC4	A	973	981	Right-handed alpha
Helix 23	AC5	A	982	1030	Right-handed alpha
Helix 24	AC6	B	291	301	Right-handed alpha
Helix 25	AC7	B	335	340	Right-handed alpha
Helix 26	AC8	B	362	368	Right-handed alpha
Helix 27	AC9	B	380	384	Right-handed 310
Helix 28	AD1	B	413	419	Right-handed alpha
Helix 29	AD2	B	618	622	Right-handed 310
Helix 30	AD3	B	734	740	Right-handed alpha
Helix 31	AD4	B	743	752	Right-handed alpha
Helix 32	AD5	B	757	780	Right-handed alpha
Helix 33	AD6	B	813	824	Right-handed alpha
Helix 34	AD7	B	863	882	Right-handed alpha
Helix 35	AD8	B	883	887	Right-handed 310
Helix 36	AD9	B	894	905	Right-handed alpha
Helix 37	AE1	B	910	937	Right-handed alpha
Helix 38	AE2	B	942	962	Right-handed alpha
Helix 39	AE3	B	963	965	Right-handed 310
Helix 40	AE4	B	973	980	Right-handed alpha
Helix 41	AE5	B	982	1030	Right-handed alpha
Helix 42	AE6	C	69	73	Right-handed 310
Helix 43	AE7	C	291	301	Right-handed alpha
Helix 44	AE8	C	335	340	Right-handed alpha
Helix 45	AE9	C	362	368	Right-handed alpha
Helix 46	AF1	C	403	408	Right-handed alpha
Helix 47	AF2	C	435	440	Right-handed alpha
Helix 48	AF3	C	445	449	Right-handed 310
Helix 49	AF4	C	539	543	Right-handed 310
Helix 50	AF5	C	620	624	Right-handed 310
Helix 51	AF6	C	734	740	Right-handed alpha
Helix 52	AF7	C	743	751	Right-handed alpha
Helix 53	AF8	C	752	754	Right-handed 310
Helix 54	AF9	C	757	780	Right-handed alpha
Helix 55	AG1	C	813	824	Right-handed alpha
Helix 56	AG2	C	846	852	Right-handed alpha
Helix 57	AG3	C	863	882	Right-handed alpha
Helix 58	AG4	C	883	887	Right-handed 310
Helix 59	AG5	C	894	905	Right-handed alpha
Helix 60	AG6	C	909	937	Right-handed alpha
Helix 61	AG7	C	942	962	Right-handed alpha
Helix 62	AG8	C	963	965	Right-handed 310
Helix 63	AG9	C	973	980	Right-handed alpha
Helix 64	AH1	C	982	1030	Right-handed alpha

There are 47 sheets in PDB entry 7QO7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	61	63	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	219	226	parallel
Strand 3	A	195	201	anti-parallel
Strand 4	A	186	192	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	268	276	anti-parallel
Strand 3	A	282	287	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	67	first strand
Strand 2	A	260	263	anti-parallel
Strand 3	A	91	92	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	234	235	anti-parallel
Strand 3	A	104	105	anti-parallel
Strand 4	A	114	116	anti-parallel
Strand 5	A	126	133	anti-parallel
Strand 6	A	155	165	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	A	238	239	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	316	first strand
Strand 2	A	589	596	anti-parallel
Strand 3	A	606	610	anti-parallel
Strand 4	A	645	648	anti-parallel
Strand 5	A	639	641	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	325	first strand
Strand 2	A	535	540	parallel
Strand 3	A	547	551	anti-parallel
Strand 4	A	581	585	anti-parallel
Strand 5	A	572	574	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	373	first strand
Strand 2	A	429	433	anti-parallel
Strand 3	A	507	510	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	651	652	first strand
Strand 2	A	688	693	parallel
Strand 3	A	667	672	anti-parallel
Strand 4	A	661	664	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	699	first strand
Strand 2	C	784	785	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	725	first strand
Strand 2	A	1056	1074	anti-parallel
Strand 3	A	1044	1053	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	725	first strand
Strand 2	A	1056	1074	anti-parallel
Strand 3	A	1091	1094	anti-parallel
Strand 4	A	1099	1102	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	733	first strand
Strand 2	A	855	858	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	784	785	first strand
Strand 2	B	698	699	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1119	first strand
Strand 2	A	1084	1087	anti-parallel
Strand 3	A	1078	1079	anti-parallel
Strand 4	A	1130	1131	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	63	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	219	226	parallel
Strand 3	B	195	201	anti-parallel
Strand 4	B	186	192	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	51	first strand
Strand 2	B	272	276	anti-parallel
Strand 3	B	282	287	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	268	269	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	260	263	anti-parallel
Strand 3	B	91	92	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	83	first strand
Strand 2	B	234	235	anti-parallel
Strand 3	B	104	105	anti-parallel
Strand 4	B	114	117	anti-parallel
Strand 5	B	126	133	anti-parallel
Strand 6	B	155	165	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	316	first strand
Strand 2	B	589	596	anti-parallel
Strand 3	B	606	610	anti-parallel
Strand 4	B	645	648	anti-parallel
Strand 5	B	640	642	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	323	first strand
Strand 2	B	535	540	parallel
Strand 3	B	543	548	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	355	first strand
Strand 2	B	392	395	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	376	first strand
Strand 2	B	429	434	anti-parallel
Strand 3	B	505	509	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	572	574	first strand
Strand 2	B	581	583	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	651	652	first strand
Strand 2	B	688	693	parallel
Strand 3	B	667	672	anti-parallel
Strand 4	B	662	663	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	725	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1044	1053	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	725	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1091	1094	anti-parallel
Strand 4	B	1099	1102	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	733	first strand
Strand 2	B	855	857	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	784	785	first strand
Strand 2	C	698	699	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1122	first strand
Strand 2	B	1083	1087	anti-parallel
Strand 3	B	1078	1079	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	61	63	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	268	276	anti-parallel
Strand 3	C	282	287	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	67	first strand
Strand 2	C	260	261	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	114	first strand
Strand 2	C	126	133	anti-parallel
Strand 3	C	155	165	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	192	first strand
Strand 2	C	195	201	anti-parallel
Strand 3	C	221	226	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	316	first strand
Strand 2	C	589	596	anti-parallel
Strand 3	C	606	610	anti-parallel
Strand 4	C	645	648	anti-parallel
Strand 5	C	640	641	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	355	first strand
Strand 2	C	390	394	anti-parallel
Strand 3	C	505	513	anti-parallel
Strand 4	C	397	399	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	355	first strand
Strand 2	C	390	394	anti-parallel
Strand 3	C	505	513	anti-parallel
Strand 4	C	429	434	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	537	first strand
Strand 2	C	546	551	anti-parallel
Strand 3	C	582	585	anti-parallel
Strand 4	C	572	573	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	651	652	first strand
Strand 2	C	688	693	parallel
Strand 3	C	667	672	anti-parallel
Strand 4	C	661	664	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	709	725	first strand
Strand 2	C	1056	1074	anti-parallel
Strand 3	C	1044	1053	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	709	725	first strand
Strand 2	C	1056	1074	anti-parallel
Strand 3	C	1091	1094	anti-parallel
Strand 4	C	1099	1102	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	733	first strand
Strand 2	C	855	858	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1117	1119	first strand
Strand 2	C	1084	1087	anti-parallel
Strand 3	C	1078	1079	anti-parallel
Strand 4	C	1130	1131	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QO7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QO7