Analysis of interatomic Contacts of Structural Units in PDB entry:
7QOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QOF entry

There are 21 chains in PDB entry 7QOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 504
B
 ALA 2GLY 504
C
 ALA 2GLY 504
D
 ALA 2GLY 504
E
 ALA 2GLY 504
F
 ALA 2GLY 504
G
 ALA 2GLY 504
H
 ALA 2GLY 504
I
 ALA 2GLY 504
a
 MET 1LEU 333
b
 MET 1LEU 333
c
 MET 1LEU 333
d
 MET 1LEU 333
e
 MET 1LEU 333
f
 MET 1LEU 333
g
 MET 1LEU 333
h
 MET 1LEU 333
i
 MET 1LEU 333
j
 MET 1THR 58
k
 MET 1THR 58
l
 MET 1GLY 38
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are158 helices in PDB entry 7QOF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 28Right-handed alpha
Helix 2
AA2
A
43 48Right-handed 310
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
162 167Right-handed 310
Helix 5
AA5
A
214 216Right-handed 310
Helix 6
AA6
A
243 266Right-handed alpha
Helix 7
AA7
A
291 296Right-handed alpha
Helix 8
AA8
A
308 320Right-handed alpha
Helix 9
AA9
A
337 348Right-handed alpha
Helix 10
AB1
A
402 406Right-handed 310
Helix 11
AB2
A
419 423Right-handed 310
Helix 12
AB3
A
501 503Right-handed 310
Helix 13
AB4
B
21 27Right-handed alpha
Helix 14
AB5
B
50 58Right-handed alpha
Helix 15
AB6
B
162 167Right-handed 310
Helix 16
AB7
B
214 216Right-handed 310
Helix 17
AB8
B
242 266Right-handed alpha
Helix 18
AB9
B
291 296Right-handed alpha
Helix 19
AC1
B
308 324Right-handed alpha
Helix 20
AC2
B
336 352Right-handed alpha
Helix 21
AC3
B
360 365Right-handed alpha
Helix 22
AC4
B
402 405Right-handed 310
Helix 23
AC5
B
419 424Right-handed 310
Helix 24
AC6
B
490 494Right-handed 310
Helix 25
AC7
C
21 28Right-handed alpha
Helix 26
AC8
C
50 57Right-handed alpha
Helix 27
AC9
C
162 166Right-handed 310
Helix 28
AD1
C
214 216Right-handed 310
Helix 29
AD2
C
244 266Right-handed alpha
Helix 30
AD3
C
291 297Right-handed alpha
Helix 31
AD4
C
308 324Right-handed alpha
Helix 32
AD5
C
325 328Right-handed 310
Helix 33
AD6
C
336 352Right-handed alpha
Helix 34
AD7
C
361 365Right-handed alpha
Helix 35
AD8
C
402 405Right-handed 310
Helix 36
AD9
C
421 423Right-handed 310
Helix 37
AE1
C
490 494Right-handed 310
Helix 38
AE2
C
501 503Right-handed 310
Helix 39
AE3
D
21 27Right-handed alpha
Helix 40
AE4
D
50 58Right-handed alpha
Helix 41
AE5
D
214 216Right-handed 310
Helix 42
AE6
D
244 266Right-handed alpha
Helix 43
AE7
D
291 297Right-handed alpha
Helix 44
AE8
D
308 324Right-handed alpha
Helix 45
AE9
D
325 328Right-handed 310
Helix 46
AF1
D
336 352Right-handed alpha
Helix 47
AF2
D
360 365Right-handed alpha
Helix 48
AF3
D
402 405Right-handed 310
Helix 49
AF4
D
490 494Right-handed 310
Helix 50
AF5
D
501 503Right-handed 310
Helix 51
AF6
E
21 28Right-handed alpha
Helix 52
AF7
E
50 58Right-handed alpha
Helix 53
AF8
E
162 167Right-handed 310
Helix 54
AF9
E
214 216Right-handed 310
Helix 55
AG1
E
242 266Right-handed alpha
Helix 56
AG2
E
291 297Right-handed alpha
Helix 57
AG3
E
308 324Right-handed alpha
Helix 58
AG4
E
325 328Right-handed 310
Helix 59
AG5
E
336 352Right-handed alpha
Helix 60
AG6
E
360 365Right-handed alpha
Helix 61
AG7
E
402 406Right-handed 310
Helix 62
AG8
F
21 28Right-handed alpha
Helix 63
AG9
F
50 58Right-handed alpha
Helix 64
AH1
F
103 107Right-handed 310
Helix 65
AH2
F
162 166Right-handed 310
Helix 66
AH3
F
212 218Right-handed 310
Helix 67
AH4
F
243 247Right-handed 310
Helix 68
AH5
F
249 266Right-handed alpha
Helix 69
AH6
F
291 296Right-handed alpha
Helix 70
AH7
F
308 324Right-handed alpha
Helix 71
AH8
F
336 352Right-handed alpha
Helix 72
AH9
F
361 365Right-handed alpha
Helix 73
AI1
F
402 405Right-handed 310
Helix 74
AI2
F
419 423Right-handed 310
Helix 75
AI3
F
490 494Right-handed 310
Helix 76
AI4
G
21 28Right-handed alpha
Helix 77
AI5
G
36 40Right-handed 310
Helix 78
AI6
G
50 58Right-handed alpha
Helix 79
AI7
G
214 216Right-handed 310
Helix 80
AI8
G
242 247Right-handed 310
Helix 81
AI9
G
249 266Right-handed alpha
Helix 82
AJ1
G
291 297Right-handed alpha
Helix 83
AJ2
G
308 324Right-handed alpha
Helix 84
AJ3
G
336 352Right-handed alpha
Helix 85
AJ4
G
360 365Right-handed alpha
Helix 86
AJ5
G
402 405Right-handed 310
Helix 87
AJ6
G
490 494Right-handed 310
Helix 88
AJ7
G
501 503Right-handed 310
Helix 89
AJ8
H
21 28Right-handed alpha
Helix 90
AJ9
H
50 58Right-handed alpha
Helix 91
AK1
H
162 167Right-handed 310
Helix 92
AK2
H
214 216Right-handed 310
Helix 93
AK3
H
242 266Right-handed alpha
Helix 94
AK4
H
291 297Right-handed alpha
Helix 95
AK5
H
308 324Right-handed alpha
Helix 96
AK6
H
336 353Right-handed alpha
Helix 97
AK7
H
361 365Right-handed alpha
Helix 98
AK8
H
402 406Right-handed 310
Helix 99
AK9
H
421 423Right-handed 310
Helix 100
AL1
H
490 494Right-handed 310
Helix 101
AL2
H
501 503Right-handed 310
Helix 102
AL3
I
21 28Right-handed alpha
Helix 103
AL4
I
50 58Right-handed alpha
Helix 104
AL5
I
214 216Right-handed 310
Helix 105
AL6
I
243 266Right-handed alpha
Helix 106
AL7
I
291 296Right-handed alpha
Helix 107
AL8
I
297 299Right-handed 310
Helix 108
AL9
I
308 324Right-handed alpha
Helix 109
AM1
I
325 328Right-handed 310
Helix 110
AM2
I
336 352Right-handed alpha
Helix 111
AM3
I
360 365Right-handed alpha
Helix 112
AM4
I
402 406Right-handed 310
Helix 113
AM5
I
419 423Right-handed 310
Helix 114
AM6
I
490 494Right-handed 310
Helix 115
AM7
I
501 503Right-handed 310
Helix 116
AM8
a
20 24Right-handed 310
Helix 117
AM9
a
85 90Right-handed alpha
Helix 118
AN1
a
129 146Right-handed alpha
Helix 119
AN2
a
239 251Right-handed alpha
Helix 120
AN3
a
312 327Right-handed alpha
Helix 121
AN4
b
20 24Right-handed 310
Helix 122
AN5
b
129 146Right-handed alpha
Helix 123
AN6
b
239 251Right-handed alpha
Helix 124
AN7
b
312 327Right-handed alpha
Helix 125
AN8
c
20 24Right-handed 310
Helix 126
AN9
c
70 74Right-handed 310
Helix 127
AO1
c
129 146Right-handed alpha
Helix 128
AO2
c
239 251Right-handed alpha
Helix 129
AO3
c
312 327Right-handed alpha
Helix 130
AO4
d
129 146Right-handed alpha
Helix 131
AO5
d
239 251Right-handed alpha
Helix 132
AO6
d
312 327Right-handed alpha
Helix 133
AO7
e
129 145Right-handed alpha
Helix 134
AO8
e
239 251Right-handed alpha
Helix 135
AO9
e
312 327Right-handed alpha
Helix 136
AP1
f
20 24Right-handed 310
Helix 137
AP2
f
70 74Right-handed 310
Helix 138
AP3
f
129 146Right-handed alpha
Helix 139
AP4
f
176 180Right-handed 310
Helix 140
AP5
f
239 251Right-handed alpha
Helix 141
AP6
f
312 327Right-handed alpha
Helix 142
AP7
g
69 74Right-handed alpha
Helix 143
AP8
g
129 146Right-handed alpha
Helix 144
AP9
g
163 165Right-handed 310
Helix 145
AQ1
g
176 180Right-handed 310
Helix 146
AQ2
g
239 255Right-handed alpha
Helix 147
AQ3
g
312 327Right-handed alpha
Helix 148
AQ4
h
129 145Right-handed alpha
Helix 149
AQ5
h
176 180Right-handed 310
Helix 150
AQ6
h
239 251Right-handed alpha
Helix 151
AQ7
h
315 327Right-handed alpha
Helix 152
AQ8
i
69 73Right-handed 310
Helix 153
AQ9
i
129 146Right-handed alpha
Helix 154
AR1
i
239 255Right-handed alpha
Helix 155
AR2
i
312 327Right-handed alpha
Helix 156
AR3
j
6 11Right-handed alpha
Helix 157
AR4
j
17 21Right-handed 310
Helix 158
AR5
k
6 11Right-handed alpha
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