Analysis of interatomic Contacts of Structural Units in PDB entry:
7QOG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QOG entry

There are 5 chains in PDB entry 7QOG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 6	GLU 739
B	MET 1	HIS 236
C	MET 1	ARG 225
M	ALA 425	GLY 552
N	PHE 214	PRO 245

There are 45 helices in PDB entry 7QOG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	18	32	Right-handed alpha
Helix 3	AA3	A	43	55	Right-handed alpha
Helix 4	AA4	A	87	101	Right-handed alpha
Helix 5	AA5	A	116	138	Right-handed alpha
Helix 6	AA6	A	143	153	Right-handed alpha
Helix 7	AA7	A	158	179	Right-handed alpha
Helix 8	AA8	A	179	192	Right-handed alpha
Helix 9	AA9	A	242	251	Right-handed alpha
Helix 10	AB1	A	255	264	Right-handed alpha
Helix 11	AB2	A	429	454	Right-handed alpha
Helix 12	AB3	A	472	484	Right-handed alpha
Helix 13	AB4	A	492	494	Right-handed 310
Helix 14	AB5	A	495	500	Right-handed alpha
Helix 15	AB6	A	504	509	Right-handed 310
Helix 16	AB7	A	518	541	Right-handed alpha
Helix 17	AB8	A	565	571	Right-handed alpha
Helix 18	AB9	A	571	598	Right-handed alpha
Helix 19	AC1	A	599	600	Right-handed 310
Helix 20	AC2	A	601	602	Right-handed 310
Helix 21	AC3	A	603	608	Right-handed alpha
Helix 22	AC4	A	614	618	Right-handed 310
Helix 23	AC5	A	624	628	Right-handed 310
Helix 24	AC6	A	635	654	Right-handed alpha
Helix 25	AC7	A	659	668	Right-handed alpha
Helix 26	AC8	A	673	738	Right-handed alpha
Helix 27	AC9	B	11	18	Right-handed alpha
Helix 28	AD1	B	27	43	Right-handed alpha
Helix 29	AD2	B	147	170	Right-handed alpha
Helix 30	AD3	B	173	197	Right-handed alpha
Helix 31	AD4	B	199	211	Right-handed alpha
Helix 32	AD5	C	2	15	Right-handed alpha
Helix 33	AD6	C	24	45	Right-handed alpha
Helix 34	AD7	C	52	56	Right-handed 310
Helix 35	AD8	C	72	76	Right-handed 310
Helix 36	AD9	C	111	116	Right-handed alpha
Helix 37	AE1	C	144	150	Right-handed 310
Helix 38	AE2	C	163	168	Right-handed alpha
Helix 39	AE3	C	179	183	Right-handed 310
Helix 40	AE4	C	191	208	Right-handed alpha
Helix 41	AE5	M	491	496	Right-handed alpha
Helix 42	AE6	M	497	499	Right-handed 310
Helix 43	AE7	M	504	512	Right-handed alpha
Helix 44	AE8	M	521	552	Right-handed alpha
Helix 45	AE9	N	219	236	Right-handed alpha

There are 12 sheets in PDB entry 7QOG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	109	first strand
Strand 2	A	630	633	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	212	first strand
Strand 2	A	196	204	anti-parallel
Strand 3	A	415	419	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	234	241	anti-parallel
Strand 3	A	328	347	anti-parallel
Strand 4	A	354	360	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	234	241	anti-parallel
Strand 3	A	328	347	anti-parallel
Strand 4	A	372	387	anti-parallel
Strand 5	A	391	397	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	460	first strand
Strand 2	A	514	515	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	9	first strand
Strand 2	B	143	145	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	57	first strand
Strand 2	B	125	133	anti-parallel
Strand 3	B	70	76	anti-parallel
Strand 4	B	82	83	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	63	first strand
Strand 2	B	117	120	anti-parallel
Strand 3	B	111	113	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	66	first strand
Strand 2	C	79	82	anti-parallel
Strand 3	C	138	141	anti-parallel
Strand 4	C	128	132	anti-parallel
Strand 5	C	107	109	parallel
Strand 6	C	96	98	anti-parallel
Strand 7	C	152	157	anti-parallel
Strand 8	C	57	66	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	429	430	first strand
Strand 2	M	437	438	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	441	443	first strand
Strand 2	M	476	478	anti-parallel
Strand 3	M	481	483	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	458	459	first strand
Strand 2	M	470	471	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QOG

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QOG