Analysis of interatomic Contacts of Structural Units in PDB entry:
7QPO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QPO entry

There are 2 chains in PDB entry 7QPO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10LYS 354
B
 ALA 4LYS 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7QPO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 58Right-handed alpha
Helix 2
AA2
A
58 67Right-handed alpha
Helix 3
AA3
A
106 118Right-handed alpha
Helix 4
AA4
A
198 201Right-handed 310
Helix 5
AA5
A
208 226Right-handed alpha
Helix 6
AA6
A
273 287Right-handed alpha
Helix 7
AA7
B
46 58Right-handed alpha
Helix 8
AA8
B
58 67Right-handed alpha
Helix 9
AA9
B
106 118Right-handed alpha
Helix 10
AB1
B
198 201Right-handed 310
Helix 11
AB2
B
208 226Right-handed alpha
Helix 12
AB3
B
273 287Right-handed alpha
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There are 2 sheets in PDB entry 7QPO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 32 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 175first strand
Strand 2
A
179 187anti-parallel
Strand 3
A
191 196anti-parallel
Strand 4
A
242 246parallel
Strand 5
A
257 263anti-parallel
Strand 6
A
295 300parallel
Strand 7
A
306 317anti-parallel
Strand 8
A
320 329anti-parallel
Strand 9
A
157 160anti-parallel
Strand 10
A
141 147anti-parallel
Strand 11
A
130 136anti-parallel
Strand 12
A
90 95parallel
Strand 13
A
77 81anti-parallel
Strand 14
A
30 37parallel
Strand 15
A
20 27anti-parallel
Strand 16
A
331 339anti-parallel
Strand 17
B
331 339anti-parallel
Strand 18
B
20 27anti-parallel
Strand 19
B
30 37anti-parallel
Strand 20
B
77 81parallel
Strand 21
B
90 95anti-parallel
Strand 22
B
130 136parallel
Strand 23
B
141 147anti-parallel
Strand 24
B
157 160anti-parallel
Strand 25
B
320 329anti-parallel
Strand 26
B
306 317anti-parallel
Strand 27
B
295 300anti-parallel
Strand 28
B
257 263parallel
Strand 29
B
242 246anti-parallel
Strand 30
B
191 196parallel
Strand 31
B
180 187anti-parallel
Strand 32
B
165 174anti-parallel
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There are 26 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
257 263anti-parallel
Strand 3
A
295 300parallel
Strand 4
A
306 317anti-parallel
Strand 5
A
320 329anti-parallel
Strand 6
A
157 160anti-parallel
Strand 7
A
141 147anti-parallel
Strand 8
A
130 136anti-parallel
Strand 9
A
90 95parallel
Strand 10
A
77 81anti-parallel
Strand 11
A
30 37parallel
Strand 12
A
20 27anti-parallel
Strand 13
A
331 339anti-parallel
Strand 14
B
331 339anti-parallel
Strand 15
B
20 27anti-parallel
Strand 16
B
30 37anti-parallel
Strand 17
B
77 81parallel
Strand 18
B
90 95anti-parallel
Strand 19
B
130 136parallel
Strand 20
B
141 147anti-parallel
Strand 21
B
157 160anti-parallel
Strand 22
B
320 329anti-parallel
Strand 23
B
306 317anti-parallel
Strand 24
B
295 300anti-parallel
Strand 25
B
257 263parallel
Strand 26
B
267 268anti-parallel
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