Analysis of interatomic Contacts of Structural Units in PDB entry:
7QQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QQL entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 9 chains in PDB entry 7QQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 70ASP 472
F
 PRO 731PRO 731
F
 THR 733LEU 735
A
 ASN 70ASP 472
B
 ASN 70ASP 472
D
 PRO 731PRO 731
D
 THR 733LEU 735
E
 PRO 731PRO 731
E
 THR 733LEU 735
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7QQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
92 95Right-handed 310
Helix 2
AA2
C
107 113Right-handed alpha
Helix 3
AA3
C
133 143Right-handed alpha
Helix 4
AA4
C
164 181Right-handed alpha
Helix 5
AA5
C
185 194Right-handed alpha
Helix 6
AA6
C
197 213Right-handed alpha
Helix 7
AA7
C
215 224Right-handed alpha
Helix 8
AA8
C
225 237Right-handed alpha
Helix 9
AA9
C
238 252Right-handed alpha
Helix 10
AB1
C
257 268Right-handed alpha
Helix 11
AB2
C
269 285Right-handed alpha
Helix 12
AB3
C
287 296Right-handed alpha
Helix 13
AB4
C
297 309Right-handed alpha
Helix 14
AB5
C
320 335Right-handed alpha
Helix 15
AB6
C
342 353Right-handed alpha
Helix 16
AB7
C
354 369Right-handed alpha
Helix 17
AB8
C
372 381Right-handed alpha
Helix 18
AB9
C
382 413Right-handed alpha
Helix 19
AC1
C
417 429Right-handed alpha
Helix 20
AC2
C
432 445Right-handed alpha
Helix 21
AC3
C
447 456Right-handed alpha
Helix 22
AC4
C
457 469Right-handed alpha
Helix 23
AC5
A
107 112Right-handed alpha
Helix 24
AC6
A
133 143Right-handed alpha
Helix 25
AC7
A
167 180Right-handed alpha
Helix 26
AC8
A
185 194Right-handed alpha
Helix 27
AC9
A
197 213Right-handed alpha
Helix 28
AD1
A
215 224Right-handed alpha
Helix 29
AD2
A
225 237Right-handed alpha
Helix 30
AD3
A
238 250Right-handed alpha
Helix 31
AD4
A
251 256Right-handed 310
Helix 32
AD5
A
257 268Right-handed alpha
Helix 33
AD6
A
269 285Right-handed alpha
Helix 34
AD7
A
287 296Right-handed alpha
Helix 35
AD8
A
297 309Right-handed alpha
Helix 36
AD9
A
320 335Right-handed alpha
Helix 37
AE1
A
342 353Right-handed alpha
Helix 38
AE2
A
354 369Right-handed alpha
Helix 39
AE3
A
372 381Right-handed alpha
Helix 40
AE4
A
382 412Right-handed alpha
Helix 41
AE5
A
417 429Right-handed alpha
Helix 42
AE6
A
432 445Right-handed alpha
Helix 43
AE7
A
447 456Right-handed alpha
Helix 44
AE8
A
457 469Right-handed alpha
Helix 45
AE9
B
92 95Right-handed 310
Helix 46
AF1
B
107 113Right-handed alpha
Helix 47
AF2
B
133 144Right-handed alpha
Helix 48
AF3
B
167 181Right-handed alpha
Helix 49
AF4
B
185 194Right-handed alpha
Helix 50
AF5
B
197 213Right-handed alpha
Helix 51
AF6
B
215 224Right-handed alpha
Helix 52
AF7
B
225 237Right-handed alpha
Helix 53
AF8
B
238 252Right-handed alpha
Helix 54
AF9
B
257 268Right-handed alpha
Helix 55
AG1
B
269 285Right-handed alpha
Helix 56
AG2
B
287 296Right-handed alpha
Helix 57
AG3
B
297 309Right-handed alpha
Helix 58
AG4
B
320 334Right-handed alpha
Helix 59
AG5
B
342 353Right-handed alpha
Helix 60
AG6
B
354 369Right-handed alpha
Helix 61
AG7
B
372 381Right-handed alpha
Helix 62
AG8
B
382 398Right-handed alpha
Helix 63
AG9
B
398 412Right-handed alpha
Helix 64
AH1
B
417 428Right-handed alpha
Helix 65
AH2
B
432 445Right-handed alpha
Helix 66
AH3
B
447 456Right-handed alpha
Helix 67
AH4
B
457 469Right-handed alpha
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There are 6 sheets in PDB entry 7QQL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 77first strand
Strand 2
C
147 153anti-parallel
Strand 3
C
120 124anti-parallel
Strand 4
C
127 128anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 103first strand
Strand 2
C
86 91anti-parallel
Strand 3
F
732 735anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 77first strand
Strand 2
A
147 154anti-parallel
Strand 3
A
119 124anti-parallel
Strand 4
A
127 128anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
86 89anti-parallel
Strand 3
E
732 735anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 77first strand
Strand 2
B
147 154anti-parallel
Strand 3
B
119 124anti-parallel
Strand 4
B
127 128anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 103first strand
Strand 2
B
86 91anti-parallel
Strand 3
D
732 735anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il