Analysis of interatomic Contacts of Structural Units in PDB entry:
7QRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QRU entry

There are 8 chains in PDB entry 7QRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 MET 1LEU 491
A
 MET 1VAL 805
B
 LYS 5MET 144
C
 MET 1GLU 112
E
 MET 1ASN 158
F
 MET 1GLY 91
G
 MET 1LYS 113
e
 MET 1PHE 47
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 7QRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
2 5Right-handed 310
Helix 2
AA2
D
6 19Right-handed alpha
Helix 3
AA3
D
25 55Right-handed alpha
Helix 4
AA4
D
62 64Right-handed 310
Helix 5
AA5
D
75 98Right-handed alpha
Helix 6
AA6
D
101 106Right-handed alpha
Helix 7
AA7
D
108 126Right-handed alpha
Helix 8
AA8
D
128 149Right-handed alpha
Helix 9
AA9
D
152 185Right-handed alpha
Helix 10
AB1
D
188 199Right-handed alpha
Helix 11
AB2
D
203 221Right-handed alpha
Helix 12
AB3
D
231 235Right-handed 310
Helix 13
AB4
D
237 263Right-handed alpha
Helix 14
AB5
D
267 292Right-handed alpha
Helix 15
AB6
D
295 318Right-handed alpha
Helix 16
AB7
D
319 352Right-handed alpha
Helix 17
AB8
D
355 359Right-handed 310
Helix 18
AB9
D
361 366Right-handed alpha
Helix 19
AC1
D
366 381Right-handed alpha
Helix 20
AC2
D
386 402Right-handed alpha
Helix 21
AC3
D
404 430Right-handed alpha
Helix 22
AC4
D
437 442Right-handed alpha
Helix 23
AC5
D
445 465Right-handed alpha
Helix 24
AC6
D
465 481Right-handed alpha
Helix 25
AC7
D
482 491Right-handed alpha
Helix 26
AC8
A
2 24Right-handed alpha
Helix 27
AC9
A
29 47Right-handed alpha
Helix 28
AD1
A
48 53Right-handed alpha
Helix 29
AD2
A
66 69Right-handed 310
Helix 30
AD3
A
77 102Right-handed alpha
Helix 31
AD4
A
108 129Right-handed alpha
Helix 32
AD5
A
131 151Right-handed alpha
Helix 33
AD6
A
156 189Right-handed alpha
Helix 34
AD7
A
192 199Right-handed alpha
Helix 35
AD8
A
200 205Right-handed alpha
Helix 36
AD9
A
208 224Right-handed alpha
Helix 37
AE1
A
228 230Right-handed 310
Helix 38
AE2
A
231 236Right-handed alpha
Helix 39
AE3
A
237 239Right-handed 310
Helix 40
AE4
A
240 250Right-handed alpha
Helix 41
AE5
A
251 268Right-handed alpha
Helix 42
AE6
A
270 294Right-handed alpha
Helix 43
AE7
A
297 321Right-handed alpha
Helix 44
AE8
A
321 327Right-handed alpha
Helix 45
AE9
A
328 330Right-handed 310
Helix 46
AF1
A
332 368Right-handed alpha
Helix 47
AF2
A
382 398Right-handed alpha
Helix 48
AF3
A
402 420Right-handed alpha
Helix 49
AF4
A
425 457Right-handed alpha
Helix 50
AF5
A
473 493Right-handed alpha
Helix 51
AF6
A
494 498Right-handed 310
Helix 52
AF7
A
501 510Right-handed alpha
Helix 53
AF8
A
531 550Right-handed alpha
Helix 54
AF9
A
550 555Right-handed alpha
Helix 55
AG1
A
557 562Right-handed alpha
Helix 56
AG2
A
566 590Right-handed alpha
Helix 57
AG3
A
593 616Right-handed alpha
Helix 58
AG4
A
630 647Right-handed alpha
Helix 59
AG5
A
648 650Right-handed 310
Helix 60
AG6
A
652 674Right-handed alpha
Helix 61
AG7
A
676 699Right-handed alpha
Helix 62
AG8
A
710 743Right-handed alpha
Helix 63
AG9
A
748 755Right-handed alpha
Helix 64
AH1
A
763 771Right-handed alpha
Helix 65
AH2
A
773 797Right-handed alpha
Helix 66
AH3
B
8 33Right-handed alpha
Helix 67
AH4
B
39 58Right-handed alpha
Helix 68
AH5
B
59 67Right-handed alpha
Helix 69
AH6
B
70 86Right-handed alpha
Helix 70
AH7
B
87 92Right-handed alpha
Helix 71
AH8
B
116 141Right-handed alpha
Helix 72
AH9
C
2 21Right-handed alpha
Helix 73
AI1
C
24 47Right-handed alpha
Helix 74
AI2
C
56 60Right-handed 310
Helix 75
AI3
C
66 99Right-handed alpha
Helix 76
AI4
C
102 107Right-handed 310
Helix 77
AI5
E
2 19Right-handed alpha
Helix 78
AI6
E
23 42Right-handed alpha
Helix 79
AI7
E
49 80Right-handed alpha
Helix 80
AI8
E
99 113Right-handed alpha
Helix 81
AI9
E
137 148Right-handed alpha
Helix 82
AJ1
E
148 158Right-handed alpha
Helix 83
AJ2
F
2 27Right-handed alpha
Helix 84
AJ3
F
29 55Right-handed alpha
Helix 85
AJ4
F
60 85Right-handed alpha
Helix 86
AJ5
G
2 29Right-handed alpha
Helix 87
AJ6
G
31 63Right-handed alpha
Helix 88
AJ7
G
66 95Right-handed alpha
Helix 89
AJ8
G
105 111Right-handed alpha
Helix 90
AJ9
e
2 20Right-handed alpha
Helix 91
AK1
e
23 41Right-handed alpha
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There are 4 sheets in PDB entry 7QRU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 60first strand
Strand 2
D
71 74anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 65first strand
Strand 2
A
70 76anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 105first strand
Strand 2
B
111 115anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
89 94first strand
Strand 2
E
127 132anti-parallel
Strand 3
E
116 121anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il