Analysis of interatomic Contacts of Structural Units in PDB entry:
7QS5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QS5 entry

There are 2 chains in PDB entry 7QS5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 609PRO 772
B
 MET 605THR 767
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7QS5

There are 6 sheets in PDB entry 7QS5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 624first strand
Strand 2
A
629 632anti-parallel
Strand 3
A
761 769anti-parallel
Strand 4
A
650 660anti-parallel
Strand 5
A
718 724anti-parallel
Strand 6
A
729 734anti-parallel
Strand 7
A
737 738anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 624first strand
Strand 2
A
629 632anti-parallel
Strand 3
A
761 769anti-parallel
Strand 4
A
650 660anti-parallel
Strand 5
A
718 724anti-parallel
Strand 6
A
729 734anti-parallel
Strand 7
A
744 745anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 641first strand
Strand 2
A
752 757anti-parallel
Strand 3
A
667 671anti-parallel
Strand 4
A
687 692anti-parallel
Strand 5
A
696 701anti-parallel
Strand 6
A
704 710anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 607first strand
Strand 2
B
650 660parallel
Strand 3
B
718 724anti-parallel
Strand 4
B
729 734anti-parallel
Strand 5
B
737 738anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 624first strand
Strand 2
B
629 632anti-parallel
Strand 3
B
761 765anti-parallel
Strand 4
B
650 660anti-parallel
Strand 5
B
718 724anti-parallel
Strand 6
B
729 734anti-parallel
Strand 7
B
744 745anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
612 617first strand
Strand 2
B
638 642anti-parallel
Strand 3
B
752 757anti-parallel
Strand 4
B
667 671anti-parallel
Strand 5
B
687 692anti-parallel
Strand 6
B
696 701anti-parallel
Strand 7
B
704 710anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il