Analysis of interatomic Contacts of Structural Units in PDB entry:
7QSG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QSG entry

There are 2 chains in PDB entry 7QSG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -2VAL 408
B
 ALA 0ILE 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7QSG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 32Right-handed alpha
Helix 2
AA2
A
94 109Right-handed alpha
Helix 3
AA3
A
124 133Right-handed alpha
Helix 4
AA4
A
148 152Right-handed 310
Helix 5
AA5
A
167 169Right-handed 310
Helix 6
AA6
A
170 179Right-handed alpha
Helix 7
AA7
A
188 199Right-handed alpha
Helix 8
AA8
A
241 253Right-handed alpha
Helix 9
AA9
A
274 279Right-handed alpha
Helix 10
AB1
A
292 303Right-handed alpha
Helix 11
AB2
A
316 325Right-handed alpha
Helix 12
AB3
A
336 341Right-handed alpha
Helix 13
AB4
A
355 368Right-handed alpha
Helix 14
AB5
A
369 388Right-handed alpha
Helix 15
AB6
A
389 407Right-handed alpha
Helix 16
AB7
B
19 31Right-handed alpha
Helix 17
AB8
B
94 103Right-handed alpha
Helix 18
AB9
B
188 200Right-handed alpha
Helix 19
AC1
B
241 254Right-handed alpha
Helix 20
AC2
B
273 280Right-handed alpha
Helix 21
AC3
B
292 303Right-handed alpha
Helix 22
AC4
B
316 326Right-handed alpha
Helix 23
AC5
B
336 341Right-handed alpha
Helix 24
AC6
B
355 369Right-handed alpha
Helix 25
AC7
B
369 378Right-handed alpha
Helix 26
AC8
B
380 387Right-handed alpha
Helix 27
AC9
B
389 404Right-handed alpha
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There are 5 sheets in PDB entry 7QSG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
34 39parallel
Strand 3
A
2 7parallel
Strand 4
A
116 120parallel
Strand 5
A
137 141parallel
Strand 6
A
183 186parallel
Strand 7
A
206 208parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 288first strand
Strand 2
A
259 263parallel
Strand 3
A
228 232parallel
Strand 4
A
305 308parallel
Strand 5
A
329 332parallel
Strand 6
A
348 351parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 2first strand
Strand 2
B
33 34parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 186first strand
Strand 2
B
206 208parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 288first strand
Strand 2
B
259 263parallel
Strand 3
B
228 231parallel
Strand 4
B
305 308parallel
Strand 5
B
329 331parallel
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