Analysis of interatomic Contacts of Structural Units in PDB entry:
7QSV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QSV entry

There are 6 chains in PDB entry 7QSV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 5	THR 186
A	ASP 188	GLU 454
B	GLN 5	THR 186
B	ASP 188	VAL 455
C	GLN 5	THR 186
C	ASP 188	TRP 371

There are185 helices in PDB entry 7QSV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	18	Right-handed alpha
Helix 2	AA2	A	42	54	Right-handed alpha
Helix 3	AA3	A	62	68	Right-handed 310
Helix 4	AA4	A	69	74	Right-handed alpha
Helix 5	AA5	A	90	94	Right-handed 310
Helix 6	AA6	A	98	107	Right-handed alpha
Helix 7	AA7	A	127	132	Right-handed alpha
Helix 8	AA8	A	140	149	Right-handed alpha
Helix 9	AA9	A	167	182	Right-handed alpha
Helix 10	AB1	A	199	219	Right-handed alpha
Helix 11	AB2	A	232	246	Right-handed alpha
Helix 12	AB3	A	255	259	Right-handed alpha
Helix 13	AB4	A	259	274	Right-handed alpha
Helix 14	AB5	A	284	289	Right-handed alpha
Helix 15	AB6	A	296	308	Right-handed alpha
Helix 16	AB7	A	324	337	Right-handed alpha
Helix 17	AB8	A	343	347	Right-handed 310
Helix 18	AB9	A	369	371	Right-handed 310
Helix 19	AC1	A	372	381	Right-handed alpha
Helix 20	AC2	A	389	394	Right-handed alpha
Helix 21	AC3	A	398	419	Right-handed alpha
Helix 22	AC4	A	426	436	Right-handed alpha
Helix 23	AC5	A	438	449	Right-handed alpha
Helix 24	AC6	B	13	18	Right-handed alpha
Helix 25	AC7	B	42	54	Right-handed alpha
Helix 26	AC8	B	62	68	Right-handed 310
Helix 27	AC9	B	69	74	Right-handed alpha
Helix 28	AD1	B	90	94	Right-handed 310
Helix 29	AD2	B	98	107	Right-handed alpha
Helix 30	AD3	B	109	113	Right-handed 310
Helix 31	AD4	B	127	132	Right-handed alpha
Helix 32	AD5	B	140	149	Right-handed alpha
Helix 33	AD6	B	167	182	Right-handed alpha
Helix 34	AD7	B	199	219	Right-handed alpha
Helix 35	AD8	B	232	246	Right-handed alpha
Helix 36	AD9	B	255	259	Right-handed alpha
Helix 37	AE1	B	259	274	Right-handed alpha
Helix 38	AE2	B	284	289	Right-handed alpha
Helix 39	AE3	B	296	308	Right-handed alpha
Helix 40	AE4	B	324	337	Right-handed alpha
Helix 41	AE5	B	343	347	Right-handed 310
Helix 42	AE6	B	369	371	Right-handed 310
Helix 43	AE7	B	372	381	Right-handed alpha
Helix 44	AE8	B	389	394	Right-handed alpha
Helix 45	AE9	B	398	419	Right-handed alpha
Helix 46	AF1	B	426	436	Right-handed alpha
Helix 47	AF2	B	438	449	Right-handed alpha
Helix 48	AF3	C	13	18	Right-handed alpha
Helix 49	AF4	C	42	54	Right-handed alpha
Helix 50	AF5	C	62	68	Right-handed 310
Helix 51	AF6	C	69	74	Right-handed alpha
Helix 52	AF7	C	90	94	Right-handed 310
Helix 53	AF8	C	98	107	Right-handed alpha
Helix 54	AF9	C	109	113	Right-handed 310
Helix 55	AG1	C	127	132	Right-handed alpha
Helix 56	AG2	C	140	149	Right-handed alpha
Helix 57	AG3	C	167	182	Right-handed alpha
Helix 58	AG4	C	199	219	Right-handed alpha
Helix 59	AG5	C	232	246	Right-handed alpha
Helix 60	AG6	C	255	259	Right-handed alpha
Helix 61	AG7	C	259	274	Right-handed alpha
Helix 62	AG8	C	283	289	Right-handed alpha
Helix 63	AG9	C	296	308	Right-handed alpha
Helix 64	AH1	C	324	337	Right-handed alpha
Helix 65	AH2	C	343	347	Right-handed 310
Helix 66	AH3	C	369	371	Right-handed 310
Helix 67	AH4	C	372	381	Right-handed alpha
Helix 68	AH5	C	389	394	Right-handed alpha
Helix 69	AH6	C	398	419	Right-handed alpha
Helix 70	AH7	C	426	437	Right-handed alpha
Helix 71	AH8	C	438	449	Right-handed alpha
Helix 72	AH9	D	13	18	Right-handed alpha
Helix 73	AI1	D	42	54	Right-handed alpha
Helix 74	AI2	D	62	68	Right-handed 310
Helix 75	AI3	D	69	74	Right-handed alpha
Helix 76	AI4	D	90	94	Right-handed 310
Helix 77	AI5	D	98	107	Right-handed alpha
Helix 78	AI6	D	127	132	Right-handed alpha
Helix 79	AI7	D	140	149	Right-handed alpha
Helix 80	AI8	D	167	182	Right-handed alpha
Helix 81	AI9	D	199	219	Right-handed alpha
Helix 82	AJ1	D	232	246	Right-handed alpha
Helix 83	AJ2	D	255	259	Right-handed alpha
Helix 84	AJ3	D	259	274	Right-handed alpha
Helix 85	AJ4	D	283	289	Right-handed alpha
Helix 86	AJ5	D	296	308	Right-handed alpha
Helix 87	AJ6	D	324	337	Right-handed alpha
Helix 88	AJ7	D	343	347	Right-handed 310
Helix 89	AJ8	D	369	371	Right-handed 310
Helix 90	AJ9	D	372	381	Right-handed alpha
Helix 91	AK1	D	389	394	Right-handed alpha
Helix 92	AK2	D	398	419	Right-handed alpha
Helix 93	AK3	D	426	437	Right-handed alpha
Helix 94	AK4	D	438	449	Right-handed alpha
Helix 95	AK5	E	12	18	Right-handed alpha
Helix 96	AK6	E	42	54	Right-handed alpha
Helix 97	AK7	E	62	68	Right-handed 310
Helix 98	AK8	E	69	74	Right-handed alpha
Helix 99	AK9	E	90	94	Right-handed 310
Helix 100	AL1	E	98	107	Right-handed alpha
Helix 101	AL2	E	127	132	Right-handed alpha
Helix 102	AL3	E	139	149	Right-handed alpha
Helix 103	AL4	E	167	182	Right-handed alpha
Helix 104	AL5	E	199	219	Right-handed alpha
Helix 105	AL6	E	232	246	Right-handed alpha
Helix 106	AL7	E	259	274	Right-handed alpha
Helix 107	AL8	E	284	289	Right-handed alpha
Helix 108	AL9	E	296	308	Right-handed alpha
Helix 109	AM1	E	324	337	Right-handed alpha
Helix 110	AM2	E	343	347	Right-handed 310
Helix 111	AM3	E	369	371	Right-handed 310
Helix 112	AM4	E	372	381	Right-handed alpha
Helix 113	AM5	E	389	394	Right-handed alpha
Helix 114	AM6	E	398	420	Right-handed alpha
Helix 115	AM7	E	426	436	Right-handed alpha
Helix 116	AM8	E	438	448	Right-handed alpha
Helix 117	AM9	F	12	18	Right-handed alpha
Helix 118	AN1	F	42	54	Right-handed alpha
Helix 119	AN2	F	62	68	Right-handed 310
Helix 120	AN3	F	69	74	Right-handed alpha
Helix 121	AN4	F	90	94	Right-handed 310
Helix 122	AN5	F	98	107	Right-handed alpha
Helix 123	AN6	F	127	132	Right-handed alpha
Helix 124	AN7	F	140	149	Right-handed alpha
Helix 125	AN8	F	167	182	Right-handed alpha
Helix 126	AN9	F	199	219	Right-handed alpha
Helix 127	AO1	F	232	246	Right-handed alpha
Helix 128	AO2	F	255	259	Right-handed alpha
Helix 129	AO3	F	259	274	Right-handed alpha
Helix 130	AO4	F	284	289	Right-handed alpha
Helix 131	AO5	F	296	308	Right-handed alpha
Helix 132	AO6	F	324	337	Right-handed alpha
Helix 133	AO7	F	343	347	Right-handed 310
Helix 134	AO8	F	369	371	Right-handed 310
Helix 135	AO9	F	372	381	Right-handed alpha
Helix 136	AP1	F	389	394	Right-handed alpha
Helix 137	AP2	F	398	420	Right-handed alpha
Helix 138	AP3	F	426	437	Right-handed alpha
Helix 139	AP4	F	438	448	Right-handed alpha
Helix 140	AP5	G	13	18	Right-handed alpha
Helix 141	AP6	G	42	54	Right-handed alpha
Helix 142	AP7	G	62	68	Right-handed 310
Helix 143	AP8	G	69	74	Right-handed alpha
Helix 144	AP9	G	90	94	Right-handed 310
Helix 145	AQ1	G	98	107	Right-handed alpha
Helix 146	AQ2	G	109	113	Right-handed 310
Helix 147	AQ3	G	127	132	Right-handed alpha
Helix 148	AQ4	G	140	149	Right-handed alpha
Helix 149	AQ5	G	167	182	Right-handed alpha
Helix 150	AQ6	G	199	219	Right-handed alpha
Helix 151	AQ7	G	232	246	Right-handed alpha
Helix 152	AQ8	G	255	259	Right-handed alpha
Helix 153	AQ9	G	259	274	Right-handed alpha
Helix 154	AR1	G	283	289	Right-handed alpha
Helix 155	AR2	G	296	308	Right-handed alpha
Helix 156	AR3	G	324	337	Right-handed alpha
Helix 157	AR4	G	343	347	Right-handed 310
Helix 158	AR5	G	369	371	Right-handed 310
Helix 159	AR6	G	372	381	Right-handed alpha
Helix 160	AR7	G	389	394	Right-handed alpha
Helix 161	AR8	G	398	419	Right-handed alpha
Helix 162	AR9	G	426	437	Right-handed alpha
Helix 163	AS1	G	438	449	Right-handed alpha
Helix 164	AS2	H	13	18	Right-handed alpha
Helix 165	AS3	H	42	54	Right-handed alpha
Helix 166	AS4	H	62	68	Right-handed 310
Helix 167	AS5	H	69	74	Right-handed alpha
Helix 168	AS6	H	90	94	Right-handed 310
Helix 169	AS7	H	98	107	Right-handed alpha
Helix 170	AS8	H	127	132	Right-handed alpha
Helix 171	AS9	H	139	149	Right-handed alpha
Helix 172	AT1	H	167	182	Right-handed alpha
Helix 173	AT2	H	199	219	Right-handed alpha
Helix 174	AT3	H	232	246	Right-handed alpha
Helix 175	AT4	H	259	274	Right-handed alpha
Helix 176	AT5	H	284	289	Right-handed alpha
Helix 177	AT6	H	296	308	Right-handed alpha
Helix 178	AT7	H	324	337	Right-handed alpha
Helix 179	AT8	H	343	347	Right-handed 310
Helix 180	AT9	H	369	371	Right-handed 310
Helix 181	AU1	H	372	381	Right-handed alpha
Helix 182	AU2	H	389	394	Right-handed alpha
Helix 183	AU3	H	398	420	Right-handed alpha
Helix 184	AU4	H	426	436	Right-handed alpha
Helix 185	AU5	H	438	449	Right-handed alpha

There are 27 sheets in PDB entry 7QSV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	81	first strand
Strand 2	A	84	89	anti-parallel
Strand 3	A	29	37	anti-parallel
Strand 4	A	116	125	anti-parallel
Strand 5	A	294	295	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	157	first strand
Strand 2	A	385	387	parallel
Strand 3	A	361	365	parallel
Strand 4	A	311	313	parallel
Strand 5	A	276	280	parallel
Strand 6	A	250	254	parallel
Strand 7	A	223	227	parallel
Strand 8	A	185	187	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	352	353	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	81	first strand
Strand 2	B	84	89	anti-parallel
Strand 3	B	29	37	anti-parallel
Strand 4	B	116	125	anti-parallel
Strand 5	B	294	295	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	157	first strand
Strand 2	B	385	387	parallel
Strand 3	B	361	365	parallel
Strand 4	B	311	313	parallel
Strand 5	B	276	280	parallel
Strand 6	B	250	254	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	187	first strand
Strand 2	B	223	225	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	352	353	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	81	first strand
Strand 2	C	84	89	anti-parallel
Strand 3	C	29	37	anti-parallel
Strand 4	C	116	125	anti-parallel
Strand 5	C	294	295	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	157	first strand
Strand 2	C	385	387	parallel
Strand 3	C	361	365	parallel
Strand 4	C	311	313	parallel
Strand 5	C	276	280	parallel
Strand 6	C	250	254	parallel
Strand 7	C	223	227	parallel
Strand 8	C	185	187	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	352	353	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	81	first strand
Strand 2	D	84	89	anti-parallel
Strand 3	D	29	37	anti-parallel
Strand 4	D	116	125	anti-parallel
Strand 5	D	294	295	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	157	first strand
Strand 2	D	385	387	parallel
Strand 3	D	361	365	parallel
Strand 4	D	311	313	parallel
Strand 5	D	276	280	parallel
Strand 6	D	250	254	parallel
Strand 7	D	223	227	parallel
Strand 8	D	185	187	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	340	first strand
Strand 2	D	352	353	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	81	first strand
Strand 2	E	84	89	anti-parallel
Strand 3	E	29	37	anti-parallel
Strand 4	E	116	125	anti-parallel
Strand 5	E	294	295	parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	157	first strand
Strand 2	E	385	387	parallel
Strand 3	E	361	365	parallel
Strand 4	E	311	313	parallel
Strand 5	E	276	280	parallel
Strand 6	E	250	254	parallel
Strand 7	E	223	227	parallel
Strand 8	E	185	187	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	340	first strand
Strand 2	E	352	353	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	81	first strand
Strand 2	F	84	89	anti-parallel
Strand 3	F	29	37	anti-parallel
Strand 4	F	116	125	anti-parallel
Strand 5	F	294	295	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	155	157	first strand
Strand 2	F	385	387	parallel
Strand 3	F	361	365	parallel
Strand 4	F	311	313	parallel
Strand 5	F	276	280	parallel
Strand 6	F	250	254	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	185	187	first strand
Strand 2	F	223	225	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	340	first strand
Strand 2	F	352	353	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	81	first strand
Strand 2	G	84	89	anti-parallel
Strand 3	G	29	37	anti-parallel
Strand 4	G	116	125	anti-parallel
Strand 5	G	294	295	parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	155	157	first strand
Strand 2	G	385	387	parallel
Strand 3	G	361	365	parallel
Strand 4	G	311	313	parallel
Strand 5	G	276	280	parallel
Strand 6	G	250	254	parallel
Strand 7	G	223	227	parallel
Strand 8	G	185	187	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	339	340	first strand
Strand 2	G	352	353	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	81	first strand
Strand 2	H	84	89	anti-parallel
Strand 3	H	29	37	anti-parallel
Strand 4	H	116	125	anti-parallel
Strand 5	H	294	295	parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	155	157	first strand
Strand 2	H	385	387	parallel
Strand 3	H	361	365	parallel
Strand 4	H	311	313	parallel
Strand 5	H	276	280	parallel
Strand 6	H	250	254	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	185	187	first strand
Strand 2	H	223	225	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	339	340	first strand
Strand 2	H	352	353	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QSV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QSV