Analysis of interatomic Contacts of Structural Units in PDB entry:
7QTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QTE entry

There are 2 chains in PDB entry 7QTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8TYR 288
B
 ILE 4TYR 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7QTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 46Right-handed alpha
Helix 2
AA2
A
57 67Right-handed alpha
Helix 3
AA3
A
133 139Right-handed alpha
Helix 4
AA4
A
141 150Right-handed alpha
Helix 5
AA5
A
196 212Right-handed alpha
Helix 6
AA6
A
213 215Right-handed 310
Helix 7
AA7
B
31 46Right-handed alpha
Helix 8
AA8
B
57 67Right-handed alpha
Helix 9
AA9
B
133 139Right-handed alpha
Helix 10
AB1
B
141 150Right-handed alpha
Helix 11
AB2
B
196 212Right-handed alpha
Helix 12
AB3
B
213 215Right-handed 310
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There are 8 sheets in PDB entry 7QTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
20 23anti-parallel
Strand 3
A
47 50parallel
Strand 4
A
227 231anti-parallel
Strand 5
A
113 120anti-parallel
Strand 6
A
248 254anti-parallel
Strand 7
A
83 90anti-parallel
Strand 8
A
79 80anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 220first strand
Strand 2
A
128 132anti-parallel
Strand 3
A
235 239anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 169first strand
Strand 2
A
152 159anti-parallel
Strand 3
A
189 192anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
180 182anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
20 23anti-parallel
Strand 3
B
47 50parallel
Strand 4
B
227 231anti-parallel
Strand 5
B
113 120anti-parallel
Strand 6
B
248 254anti-parallel
Strand 7
B
83 90anti-parallel
Strand 8
B
79 80anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 220first strand
Strand 2
B
128 132anti-parallel
Strand 3
B
235 239anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 169first strand
Strand 2
B
152 159anti-parallel
Strand 3
B
189 192anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 173first strand
Strand 2
B
180 182anti-parallel
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