Analysis of interatomic Contacts of Structural Units in PDB entry:
7QTQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QTQ entry

There are 6 chains in PDB entry 7QTQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 31	PHE 2539
A	GLN 2541	ASP 2572
A	ALA 2574	ALA 2727
B	LEU 31	PHE 2539
B	GLN 2541	ASP 2572
B	ALA 2574	ALA 2727

There are113 helices in PDB entry 7QTQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	45	Right-handed alpha
Helix 2	AA2	A	94	105	Right-handed alpha
Helix 3	AA3	A	162	173	Right-handed alpha
Helix 4	AA4	A	209	214	Right-handed alpha
Helix 5	AA5	A	215	219	Right-handed 310
Helix 6	AA6	A	220	226	Right-handed alpha
Helix 7	AA7	A	274	293	Right-handed alpha
Helix 8	AA8	A	299	312	Right-handed alpha
Helix 9	AA9	A	363	377	Right-handed alpha
Helix 10	AB1	A	422	427	Right-handed alpha
Helix 11	AB2	A	435	441	Right-handed alpha
Helix 12	AB3	A	442	444	Right-handed 310
Helix 13	AB4	A	449	457	Right-handed alpha
Helix 14	AB5	A	462	472	Right-handed alpha
Helix 15	AB6	A	474	481	Right-handed alpha
Helix 16	AB7	A	495	502	Right-handed alpha
Helix 17	AB8	A	556	572	Right-handed alpha
Helix 18	AB9	A	573	584	Right-handed alpha
Helix 19	AC1	A	593	603	Right-handed alpha
Helix 20	AC2	A	659	673	Right-handed alpha
Helix 21	AC3	A	727	743	Right-handed alpha
Helix 22	AC4	A	923	947	Right-handed alpha
Helix 23	AC5	A	954	961	Right-handed alpha
Helix 24	AC6	A	979	988	Right-handed alpha
Helix 25	AC7	A	990	1008	Right-handed alpha
Helix 26	AC8	A	1075	1087	Right-handed alpha
Helix 27	AC9	A	1147	1153	Right-handed alpha
Helix 28	AD1	A	1318	1327	Right-handed alpha
Helix 29	AD2	A	1853	1857	Right-handed alpha
Helix 30	AD3	A	1861	1863	Right-handed 310
Helix 31	AD4	A	1887	1901	Right-handed alpha
Helix 32	AD5	A	1936	1940	Right-handed 310
Helix 33	AD6	A	1989	2004	Right-handed alpha
Helix 34	AD7	A	2090	2094	Right-handed 310
Helix 35	AD8	A	2098	2100	Right-handed 310
Helix 36	AD9	A	2122	2137	Right-handed alpha
Helix 37	AE1	A	2238	2242	Right-handed 310
Helix 38	AE2	A	2319	2325	Right-handed alpha
Helix 39	AE3	A	2338	2343	Right-handed alpha
Helix 40	AE4	A	2353	2358	Right-handed alpha
Helix 41	AE5	A	2359	2370	Right-handed alpha
Helix 42	AE6	A	2387	2394	Right-handed alpha
Helix 43	AE7	A	2395	2397	Right-handed 310
Helix 44	AE8	A	2425	2441	Right-handed alpha
Helix 45	AE9	A	2446	2455	Right-handed alpha
Helix 46	AF1	A	2458	2471	Right-handed alpha
Helix 47	AF2	A	2491	2496	Right-handed alpha
Helix 48	AF3	A	2515	2520	Right-handed alpha
Helix 49	AF4	A	2520	2531	Right-handed alpha
Helix 50	AF5	A	2535	2548	Right-handed alpha
Helix 51	AF6	A	2554	2564	Right-handed alpha
Helix 52	AF7	A	2575	2589	Right-handed alpha
Helix 53	AF8	A	2591	2603	Right-handed alpha
Helix 54	AF9	A	2633	2637	Right-handed 310
Helix 55	AG1	A	2645	2666	Right-handed alpha
Helix 56	AG2	A	2711	2727	Right-handed alpha
Helix 57	AG3	B	32	45	Right-handed alpha
Helix 58	AG4	B	94	105	Right-handed alpha
Helix 59	AG5	B	162	173	Right-handed alpha
Helix 60	AG6	B	200	202	Right-handed 310
Helix 61	AG7	B	206	214	Right-handed alpha
Helix 62	AG8	B	220	228	Right-handed alpha
Helix 63	AG9	B	274	293	Right-handed alpha
Helix 64	AH1	B	299	311	Right-handed alpha
Helix 65	AH2	B	363	377	Right-handed alpha
Helix 66	AH3	B	422	427	Right-handed alpha
Helix 67	AH4	B	435	445	Right-handed alpha
Helix 68	AH5	B	449	459	Right-handed alpha
Helix 69	AH6	B	462	471	Right-handed alpha
Helix 70	AH7	B	476	481	Right-handed alpha
Helix 71	AH8	B	495	502	Right-handed alpha
Helix 72	AH9	B	556	572	Right-handed alpha
Helix 73	AI1	B	573	584	Right-handed alpha
Helix 74	AI2	B	593	604	Right-handed alpha
Helix 75	AI3	B	659	673	Right-handed alpha
Helix 76	AI4	B	727	743	Right-handed alpha
Helix 77	AI5	B	925	949	Right-handed alpha
Helix 78	AI6	B	952	961	Right-handed alpha
Helix 79	AI7	B	984	988	Right-handed alpha
Helix 80	AI8	B	990	1010	Right-handed alpha
Helix 81	AI9	B	1075	1088	Right-handed alpha
Helix 82	AJ1	B	1147	1154	Right-handed alpha
Helix 83	AJ2	B	1318	1328	Right-handed alpha
Helix 84	AJ3	B	1853	1857	Right-handed alpha
Helix 85	AJ4	B	1861	1863	Right-handed 310
Helix 86	AJ5	B	1887	1900	Right-handed alpha
Helix 87	AJ6	B	1936	1940	Right-handed 310
Helix 88	AJ7	B	1989	2004	Right-handed alpha
Helix 89	AJ8	B	2090	2094	Right-handed 310
Helix 90	AJ9	B	2098	2100	Right-handed 310
Helix 91	AK1	B	2122	2137	Right-handed alpha
Helix 92	AK2	B	2319	2325	Right-handed alpha
Helix 93	AK3	B	2338	2343	Right-handed alpha
Helix 94	AK4	B	2353	2358	Right-handed alpha
Helix 95	AK5	B	2361	2369	Right-handed alpha
Helix 96	AK6	B	2376	2379	Right-handed 310
Helix 97	AK7	B	2387	2393	Right-handed alpha
Helix 98	AK8	B	2394	2397	Right-handed 310
Helix 99	AK9	B	2425	2441	Right-handed alpha
Helix 100	AL1	B	2446	2455	Right-handed alpha
Helix 101	AL2	B	2458	2470	Right-handed alpha
Helix 102	AL3	B	2491	2496	Right-handed alpha
Helix 103	AL4	B	2515	2520	Right-handed alpha
Helix 104	AL5	B	2520	2530	Right-handed alpha
Helix 105	AL6	B	2535	2546	Right-handed alpha
Helix 106	AL7	B	2554	2564	Right-handed alpha
Helix 107	AL8	B	2575	2589	Right-handed alpha
Helix 108	AL9	B	2591	2603	Right-handed alpha
Helix 109	AM1	B	2627	2632	Right-handed alpha
Helix 110	AM2	B	2633	2637	Right-handed 310
Helix 111	AM3	B	2645	2666	Right-handed alpha
Helix 112	AM4	B	2711	2720	Right-handed alpha
Helix 113	AM5	B	2720	2727	Right-handed alpha

There are 36 sheets in PDB entry 7QTQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	235	237	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	198	first strand
Strand 2	A	203	204	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	330	first strand
Strand 2	A	336	338	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	631	first strand
Strand 2	A	634	636	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	695	697	first strand
Strand 2	A	702	704	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	771	772	first strand
Strand 2	A	899	901	anti-parallel
Strand 3	A	907	908	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1120	first strand
Strand 2	A	1123	1126	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1254	1255	first strand
Strand 2	A	1281	1282	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1366	1371	first strand
Strand 2	A	1289	1294	anti-parallel
Strand 3	A	1438	1440	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1865	1867	first strand
Strand 2	A	1942	1944	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1907	1910	first strand
Strand 2	A	1920	1923	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1971	1975	first strand
Strand 2	A	2033	2037	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1979	1981	first strand
Strand 2	A	2022	2028	anti-parallel
Strand 3	A	2010	2015	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2095	2096	first strand
Strand 2	A	2182	2185	anti-parallel
Strand 3	A	2142	2147	anti-parallel
Strand 4	A	2152	2157	anti-parallel
Strand 5	A	2111	2116	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2102	2103	first strand
Strand 2	A	2174	2175	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2200	2203	first strand
Strand 2	A	2207	2210	anti-parallel
Strand 3	A	2253	2256	parallel

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There are 11 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2212	2217	first strand
Strand 2	A	2222	2232	anti-parallel
Strand 3	A	2283	2289	anti-parallel
Strand 4	A	2329	2333	anti-parallel
Strand 5	A	2296	2302	parallel
Strand 6	A	2375	2384	parallel
Strand 7	A	2409	2413	parallel
Strand 8	A	2506	2511	parallel
Strand 9	A	2608	2613	parallel
Strand 10	A	2696	2699	parallel
Strand 11	A	2706	2708	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	53	first strand
Strand 2	B	57	58	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	235	237	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	204	first strand
Strand 2	B	197	198	anti-parallel
Strand 3	B	231	232	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	328	330	first strand
Strand 2	B	336	338	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	631	first strand
Strand 2	B	634	636	anti-parallel
Strand 3	B	650	651	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	695	697	first strand
Strand 2	B	702	704	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	771	772	first strand
Strand 2	B	899	901	anti-parallel
Strand 3	B	907	908	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1040	1041	first strand
Strand 2	B	1050	1052	anti-parallel
Strand 3	B	1058	1059	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1120	first strand
Strand 2	B	1123	1126	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1254	1255	first strand
Strand 2	B	1281	1282	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1366	1371	first strand
Strand 2	B	1289	1294	anti-parallel
Strand 3	B	1438	1440	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1865	1867	first strand
Strand 2	B	1942	1944	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1909	1910	first strand
Strand 2	B	1920	1921	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1971	1975	first strand
Strand 2	B	2033	2037	anti-parallel
Strand 3	B	2111	2116	anti-parallel
Strand 4	B	2152	2157	anti-parallel
Strand 5	B	2142	2147	anti-parallel
Strand 6	B	2182	2185	anti-parallel
Strand 7	B	2095	2097	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1979	1981	first strand
Strand 2	B	2022	2028	anti-parallel
Strand 3	B	2010	2015	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2102	2103	first strand
Strand 2	B	2174	2175	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2200	2203	first strand
Strand 2	B	2207	2210	anti-parallel
Strand 3	B	2253	2256	parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2212	2217	first strand
Strand 2	B	2222	2232	anti-parallel
Strand 3	B	2283	2289	anti-parallel
Strand 4	B	2330	2333	anti-parallel
Strand 5	B	2300	2302	parallel
Strand 6	B	2381	2384	parallel
Strand 7	B	2409	2412	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2507	2511	first strand
Strand 2	B	2609	2613	parallel
Strand 3	B	2696	2699	parallel
Strand 4	B	2706	2708	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QTQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QTQ