Analysis of interatomic Contacts of Structural Units in PDB entry:
7QTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QTY entry

There is 1 chain in PDB entry 7QTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 127PHE 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7QTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
179 181Right-handed 310
Helix 2
AA2
A
184 194Right-handed alpha
Helix 3
AA3
A
195 198Right-handed 310
Helix 4
AA4
A
242 250Right-handed alpha
Helix 5
AA5
A
283 297Right-handed alpha
Helix 6
AA6
A
312 316Right-handed 310
Helix 7
AA7
A
318 329Right-handed alpha
Helix 8
AA8
A
342 346Right-handed 310
Helix 9
AA9
A
353 362Right-handed alpha
Helix 10
AB1
A
363 366Right-handed 310
Helix 11
AB2
A
368 372Right-handed 310
Helix 12
AB3
A
379 393Right-handed alpha
Helix 13
AB4
A
396 398Right-handed 310
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There are 3 sheets in PDB entry 7QTY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 212first strand
Strand 2
A
166 171anti-parallel
Strand 3
A
256 263anti-parallel
Strand 4
A
131 143anti-parallel
Strand 5
A
146 152anti-parallel
Strand 6
A
222 228anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
200 203anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
332 338parallel
Strand 3
A
304 310parallel
Strand 4
A
275 280parallel
Strand 5
A
373 377parallel
Strand 6
A
400 402parallel
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