Analysis of interatomic Contacts of Structural Units in PDB entry:
7QU3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QU3 entry

There is 1 chain in PDB entry 7QU3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 128GLY 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7QU3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
180 182Right-handed 310
Helix 2
AA2
A
185 187Right-handed 310
Helix 3
AA3
A
188 195Right-handed alpha
Helix 4
AA4
A
196 199Right-handed 310
Helix 5
AA5
A
242 250Right-handed alpha
Helix 6
AA6
A
283 297Right-handed alpha
Helix 7
AA7
A
312 316Right-handed 310
Helix 8
AA8
A
318 329Right-handed alpha
Helix 9
AA9
A
342 346Right-handed 310
Helix 10
AB1
A
353 362Right-handed alpha
Helix 11
AB2
A
368 372Right-handed 310
Helix 12
AB3
A
379 393Right-handed alpha
Helix 13
AB4
A
396 398Right-handed 310
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There are 4 sheets in PDB entry 7QU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
147 153anti-parallel
Strand 3
A
131 139anti-parallel
Strand 4
A
256 263anti-parallel
Strand 5
A
167 172anti-parallel
Strand 6
A
208 213anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
147 153anti-parallel
Strand 3
A
223 229anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
201 204anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
332 338parallel
Strand 3
A
304 310parallel
Strand 4
A
275 280parallel
Strand 5
A
373 377parallel
Strand 6
A
400 402parallel
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