Analysis of interatomic Contacts of Structural Units in PDB entry:
7QU9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QU9 entry

There are 3 chains in PDB entry 7QU9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	GLU 463
B	ARG 4	GLU 465
C	ARG 4	GLU 355

There are 42 helices in PDB entry 7QU9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	27	Right-handed alpha
Helix 2	AA2	A	75	85	Right-handed alpha
Helix 3	AA3	A	86	88	Right-handed 310
Helix 4	AA4	A	108	114	Right-handed 310
Helix 5	AA5	A	158	174	Right-handed alpha
Helix 6	AA6	A	197	214	Right-handed alpha
Helix 7	AA7	A	233	245	Right-handed alpha
Helix 8	AA8	A	292	304	Right-handed alpha
Helix 9	AA9	A	304	324	Right-handed alpha
Helix 10	AB1	A	361	370	Right-handed alpha
Helix 11	AB2	A	372	375	Right-handed 310
Helix 12	AB3	A	379	391	Right-handed alpha
Helix 13	AB4	A	440	452	Right-handed alpha
Helix 14	AB5	A	452	463	Right-handed alpha
Helix 15	AB6	B	14	27	Right-handed alpha
Helix 16	AB7	B	75	85	Right-handed alpha
Helix 17	AB8	B	86	88	Right-handed 310
Helix 18	AB9	B	108	114	Right-handed 310
Helix 19	AC1	B	161	174	Right-handed alpha
Helix 20	AC2	B	197	214	Right-handed alpha
Helix 21	AC3	B	233	245	Right-handed alpha
Helix 22	AC4	B	290	304	Right-handed alpha
Helix 23	AC5	B	304	324	Right-handed alpha
Helix 24	AC6	B	361	370	Right-handed alpha
Helix 25	AC7	B	372	375	Right-handed 310
Helix 26	AC8	B	379	391	Right-handed alpha
Helix 27	AC9	B	440	452	Right-handed alpha
Helix 28	AD1	B	452	463	Right-handed alpha
Helix 29	AD2	C	14	27	Right-handed alpha
Helix 30	AD3	C	75	85	Right-handed alpha
Helix 31	AD4	C	86	88	Right-handed 310
Helix 32	AD5	C	108	114	Right-handed 310
Helix 33	AD6	C	159	174	Right-handed alpha
Helix 34	AD7	C	197	212	Right-handed alpha
Helix 35	AD8	C	233	245	Right-handed alpha
Helix 36	AD9	C	290	304	Right-handed alpha
Helix 37	AE1	C	304	324	Right-handed alpha
Helix 38	AE2	C	361	370	Right-handed alpha
Helix 39	AE3	C	372	375	Right-handed 310
Helix 40	AE4	C	379	391	Right-handed alpha
Helix 41	AE5	C	440	452	Right-handed alpha
Helix 42	AE6	C	452	463	Right-handed alpha

There are 9 sheets in PDB entry 7QU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	12	first strand
Strand 2	A	147	154	anti-parallel
Strand 3	A	138	142	anti-parallel
Strand 4	A	43	47	anti-parallel
Strand 5	A	32	36	anti-parallel
Strand 6	A	249	254	anti-parallel
Strand 7	A	259	264	anti-parallel
Strand 8	A	419	423	anti-parallel
Strand 9	A	426	435	anti-parallel
Strand 10	A	219	229	anti-parallel
Strand 11	A	377	378	anti-parallel

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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	73	first strand
Strand 2	A	60	65	anti-parallel
Strand 3	A	52	57	anti-parallel
Strand 4	A	130	135	anti-parallel
Strand 5	A	101	106	anti-parallel
Strand 6	A	401	406	anti-parallel
Strand 7	A	411	414	anti-parallel
Strand 8	A	267	272	anti-parallel
Strand 9	A	275	278	anti-parallel
Strand 10	A	345	355	anti-parallel
Strand 11	A	281	286	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	73	first strand
Strand 2	A	60	65	anti-parallel
Strand 3	A	52	57	anti-parallel
Strand 4	A	130	135	anti-parallel
Strand 5	A	101	106	anti-parallel
Strand 6	A	401	406	anti-parallel
Strand 7	A	411	414	anti-parallel
Strand 8	A	267	272	anti-parallel
Strand 9	A	275	278	anti-parallel
Strand 10	A	345	355	anti-parallel
Strand 11	A	332	341	anti-parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	12	first strand
Strand 2	B	147	154	anti-parallel
Strand 3	B	138	142	anti-parallel
Strand 4	B	43	47	anti-parallel
Strand 5	B	32	36	anti-parallel
Strand 6	B	249	254	anti-parallel
Strand 7	B	259	264	anti-parallel
Strand 8	B	419	423	anti-parallel
Strand 9	B	426	435	anti-parallel
Strand 10	B	219	229	anti-parallel
Strand 11	B	377	378	anti-parallel

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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	73	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	B	52	57	anti-parallel
Strand 4	B	130	135	anti-parallel
Strand 5	B	101	106	anti-parallel
Strand 6	B	401	406	anti-parallel
Strand 7	B	411	414	anti-parallel
Strand 8	B	267	272	anti-parallel
Strand 9	B	275	278	anti-parallel
Strand 10	B	345	355	anti-parallel
Strand 11	B	281	286	anti-parallel

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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	73	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	B	52	57	anti-parallel
Strand 4	B	130	135	anti-parallel
Strand 5	B	101	106	anti-parallel
Strand 6	B	401	406	anti-parallel
Strand 7	B	411	414	anti-parallel
Strand 8	B	267	272	anti-parallel
Strand 9	B	275	278	anti-parallel
Strand 10	B	345	355	anti-parallel
Strand 11	B	332	341	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	12	first strand
Strand 2	C	147	154	anti-parallel
Strand 3	C	138	142	anti-parallel
Strand 4	C	43	47	anti-parallel
Strand 5	C	32	36	anti-parallel
Strand 6	C	249	254	anti-parallel
Strand 7	C	259	264	anti-parallel
Strand 8	C	419	423	anti-parallel
Strand 9	C	426	435	anti-parallel
Strand 10	C	219	229	anti-parallel
Strand 11	C	377	378	anti-parallel

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There are 11 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	73	first strand
Strand 2	C	60	65	anti-parallel
Strand 3	C	52	57	anti-parallel
Strand 4	C	130	135	anti-parallel
Strand 5	C	101	106	anti-parallel
Strand 6	C	401	406	anti-parallel
Strand 7	C	411	414	anti-parallel
Strand 8	C	267	272	anti-parallel
Strand 9	C	275	278	anti-parallel
Strand 10	C	352	355	anti-parallel
Strand 11	C	332	333	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	285	first strand
Strand 2	C	345	349	anti-parallel
Strand 3	C	338	342	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QU9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QU9