Analysis of interatomic Contacts of Structural Units in PDB entry:
7QUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QUE entry

There are 2 chains in PDB entry 7QUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 48THR 322
B
 TYR 59THR 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7QUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 57Right-handed 310
Helix 2
AA2
A
101 115Right-handed alpha
Helix 3
AA3
A
159 180Right-handed alpha
Helix 4
AA4
A
188 190Right-handed 310
Helix 5
AA5
A
216 223Right-handed alpha
Helix 6
AA6
A
226 230Right-handed 310
Helix 7
AA7
A
231 237Right-handed alpha
Helix 8
AA8
A
241 259Right-handed alpha
Helix 9
AA9
A
267 278Right-handed alpha
Helix 10
AB1
A
284 288Right-handed 310
Helix 11
AB2
A
291 302Right-handed alpha
Helix 12
AB3
A
305 309Right-handed 310
Helix 13
AB4
A
311 318Right-handed alpha
Helix 14
AB5
A
319 322Right-handed 310
Helix 15
AB6
B
103 116Right-handed alpha
Helix 16
AB7
B
147 154Right-handed alpha
Helix 17
AB8
B
159 180Right-handed alpha
Helix 18
AB9
B
188 190Right-handed 310
Helix 19
AC1
B
222 230Right-handed 310
Helix 20
AC2
B
231 237Right-handed alpha
Helix 21
AC3
B
241 259Right-handed alpha
Helix 22
AC4
B
267 277Right-handed alpha
Helix 23
AC5
B
284 288Right-handed 310
Helix 24
AC6
B
291 300Right-handed alpha
Helix 25
AC7
B
305 309Right-handed 310
Helix 26
AC8
B
311 316Right-handed alpha
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There are 7 sheets in PDB entry 7QUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
124 129parallel
Strand 3
A
133 139anti-parallel
Strand 4
A
86 93anti-parallel
Strand 5
A
73 80anti-parallel
Strand 6
A
59 61anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
124 129parallel
Strand 3
A
133 139anti-parallel
Strand 4
A
86 93anti-parallel
Strand 5
A
73 80anti-parallel
Strand 6
A
68 69anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
99 100anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
192 194anti-parallel
Strand 3
A
203 205anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
212 213anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
74 79anti-parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
135 139anti-parallel
Strand 5
B
124 127anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
192 194anti-parallel
Strand 3
B
203 205anti-parallel
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