Analysis of interatomic Contacts of Structural Units in PDB entry:
7QUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QUG entry

There are 2 chains in PDB entry 7QUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 397
B
 MET 1LYS 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7QUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
20 27Right-handed alpha
Helix 3
AA3
A
37 41Right-handed 310
Helix 4
AA4
A
54 66Right-handed alpha
Helix 5
AA5
A
78 93Right-handed alpha
Helix 6
AA6
A
97 99Right-handed 310
Helix 7
AA7
A
106 119Right-handed alpha
Helix 8
AA8
A
133 142Right-handed alpha
Helix 9
AA9
A
161 171Right-handed alpha
Helix 10
AB1
A
191 205Right-handed alpha
Helix 11
AB2
A
227 232Right-handed alpha
Helix 12
AB3
A
243 249Right-handed alpha
Helix 13
AB4
A
250 254Right-handed 310
Helix 14
AB5
A
262 273Right-handed alpha
Helix 15
AB6
A
278 292Right-handed alpha
Helix 16
AB7
A
292 318Right-handed alpha
Helix 17
AB8
A
337 340Right-handed 310
Helix 18
AB9
A
345 355Right-handed alpha
Helix 19
AC1
A
362 365Right-handed 310
Helix 20
AC2
A
379 396Right-handed alpha
Helix 21
AC3
B
54 66Right-handed alpha
Helix 22
AC4
B
78 93Right-handed alpha
Helix 23
AC5
B
97 99Right-handed 310
Helix 24
AC6
B
106 119Right-handed alpha
Helix 25
AC7
B
133 142Right-handed alpha
Helix 26
AC8
B
161 171Right-handed alpha
Helix 27
AC9
B
191 205Right-handed alpha
Helix 28
AD1
B
227 232Right-handed alpha
Helix 29
AD2
B
243 249Right-handed alpha
Helix 30
AD3
B
250 254Right-handed 310
Helix 31
AD4
B
262 273Right-handed alpha
Helix 32
AD5
B
278 292Right-handed alpha
Helix 33
AD6
B
292 318Right-handed alpha
Helix 34
AD7
B
345 355Right-handed alpha
Helix 35
AD8
B
362 365Right-handed 310
Helix 36
AD9
B
379 396Right-handed alpha
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There are 6 sheets in PDB entry 7QUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
356 357parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 104first strand
Strand 2
A
256 259anti-parallel
Strand 3
A
238 242anti-parallel
Strand 4
A
208 212parallel
Strand 5
A
174 180parallel
Strand 6
A
124 129parallel
Strand 7
A
145 154parallel
Strand 8
A
157 160anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 335first strand
Strand 2
A
371 375anti-parallel
Strand 3
A
359 360anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 44first strand
Strand 2
B
356 360parallel
Strand 3
B
371 375anti-parallel
Strand 4
B
331 335anti-parallel
Strand 5
B
322 323anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
256 259anti-parallel
Strand 3
B
238 242anti-parallel
Strand 4
B
208 212parallel
Strand 5
B
174 180parallel
Strand 6
B
124 129parallel
Strand 7
B
145 150parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
157 159anti-parallel
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