Analysis of interatomic Contacts of Structural Units in PDB entry:
7QUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QUJ entry

There are 4 chains in PDB entry 7QUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 22PRO 280
B
 LYS 23PRO 280
C
 LYS 23PRO 280
D
 LYS 24PRO 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7QUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 50Right-handed alpha
Helix 2
AA2
A
61 73Right-handed alpha
Helix 3
AA3
A
86 102Right-handed alpha
Helix 4
AA4
A
127 139Right-handed alpha
Helix 5
AA5
A
139 157Right-handed alpha
Helix 6
AA6
A
168 172Right-handed 310
Helix 7
AA7
A
178 200Right-handed alpha
Helix 8
AA8
A
201 203Right-handed 310
Helix 9
AA9
A
216 222Right-handed alpha
Helix 10
AB1
A
226 235Right-handed alpha
Helix 11
AB2
A
236 238Right-handed 310
Helix 12
AB3
A
246 259Right-handed alpha
Helix 13
AB4
A
260 263Right-handed 310
Helix 14
AB5
B
37 50Right-handed alpha
Helix 15
AB6
B
61 73Right-handed alpha
Helix 16
AB7
B
86 102Right-handed alpha
Helix 17
AB8
B
127 139Right-handed alpha
Helix 18
AB9
B
139 157Right-handed alpha
Helix 19
AC1
B
168 172Right-handed 310
Helix 20
AC2
B
178 200Right-handed alpha
Helix 21
AC3
B
201 203Right-handed 310
Helix 22
AC4
B
216 222Right-handed alpha
Helix 23
AC5
B
226 235Right-handed alpha
Helix 24
AC6
B
236 238Right-handed 310
Helix 25
AC7
B
246 259Right-handed alpha
Helix 26
AC8
B
260 263Right-handed 310
Helix 27
AC9
C
37 50Right-handed alpha
Helix 28
AD1
C
61 74Right-handed alpha
Helix 29
AD2
C
86 102Right-handed alpha
Helix 30
AD3
C
127 139Right-handed alpha
Helix 31
AD4
C
139 157Right-handed alpha
Helix 32
AD5
C
168 172Right-handed 310
Helix 33
AD6
C
178 200Right-handed alpha
Helix 34
AD7
C
201 203Right-handed 310
Helix 35
AD8
C
216 223Right-handed alpha
Helix 36
AD9
C
226 235Right-handed alpha
Helix 37
AE1
C
236 238Right-handed 310
Helix 38
AE2
C
246 259Right-handed alpha
Helix 39
AE3
C
260 263Right-handed 310
Helix 40
AE4
D
37 50Right-handed alpha
Helix 41
AE5
D
61 73Right-handed alpha
Helix 42
AE6
D
86 102Right-handed alpha
Helix 43
AE7
D
127 139Right-handed alpha
Helix 44
AE8
D
139 157Right-handed alpha
Helix 45
AE9
D
168 172Right-handed 310
Helix 46
AF1
D
178 200Right-handed alpha
Helix 47
AF2
D
201 203Right-handed 310
Helix 48
AF3
D
216 222Right-handed alpha
Helix 49
AF4
D
226 235Right-handed alpha
Helix 50
AF5
D
236 238Right-handed 310
Helix 51
AF6
D
246 259Right-handed alpha
Helix 52
AF7
D
260 263Right-handed 310
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There are 4 sheets in PDB entry 7QUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
54 59parallel
Strand 3
A
29 33parallel
Strand 4
A
106 109parallel
Strand 5
A
162 166parallel
Strand 6
A
205 211parallel
Strand 7
A
269 272parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 81first strand
Strand 2
B
54 59parallel
Strand 3
B
29 33parallel
Strand 4
B
106 109parallel
Strand 5
B
162 166parallel
Strand 6
B
205 211parallel
Strand 7
B
269 272parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
54 59parallel
Strand 3
C
29 33parallel
Strand 4
C
106 109parallel
Strand 5
C
162 166parallel
Strand 6
C
205 211parallel
Strand 7
C
269 272parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 81first strand
Strand 2
D
54 59parallel
Strand 3
D
29 33parallel
Strand 4
D
106 109parallel
Strand 5
D
162 166parallel
Strand 6
D
205 211parallel
Strand 7
D
269 272parallel
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