Analysis of interatomic Contacts of Structural Units in PDB entry:
7QUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QUL entry

There is 1 chain in PDB entry 7QUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3PRO 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7QUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 52Right-handed alpha
Helix 2
AA2
A
76 82Right-handed 310
Helix 3
AA3
A
97 102Right-handed alpha
Helix 4
AA4
A
137 144Right-handed alpha
Helix 5
AA5
A
148 155Right-handed 310
Helix 6
AA6
A
158 169Right-handed alpha
Helix 7
AA7
A
183 196Right-handed alpha
Helix 8
AA8
A
205 214Right-handed alpha
Helix 9
AA9
A
227 243Right-handed alpha
Helix 10
AB1
A
257 266Right-handed alpha
Helix 11
AB2
A
289 294Right-handed alpha
Helix 12
AB3
A
305 307Right-handed 310
Helix 13
AB4
A
308 318Right-handed alpha
Helix 14
AB5
A
323 325Right-handed 310
Helix 15
AB6
A
334 344Right-handed alpha
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There are 4 sheets in PDB entry 7QUL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
18 21anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
31 40anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
85 88anti-parallel
Strand 5
A
134 135anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
31 40anti-parallel
Strand 3
A
350 354anti-parallel
Strand 4
A
327 331parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 222first strand
Strand 2
A
198 203parallel
Strand 3
A
175 179parallel
Strand 4
A
250 253parallel
Strand 5
A
273 276parallel
Strand 6
A
297 300parallel
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