Analysis of interatomic Contacts of Structural Units in PDB entry:
7QW4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QW4 entry

There are 20 chains in PDB entry 7QW4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	HIS 193
B	MET 194	HIS 383
C	MET 387	HIS 576
D	MET 580	HIS 772
E	MET 773	HIS 961
F	PRO 967	HIS 1158
G	MET 1159	HIS 1351
H	MET 1352	HIS 1541
I	PRO 1548	HIS 1737
J	PRO 1741	GLU 1924
K	MET 1931	HIS 2121
L	PRO 2125	HIS 2316
M	PRO 2318	HIS 2506
N	MET 2510	LEU 2691
O	MET 2703	HIS 2895
P	MET 2896	HIS 3088
Q	MET 3089	HIS 3280
R	MET 3282	HIS 3469
S	PRO 3476	HIS 3664
T	MET 3668	HIS 3855

There are137 helices in PDB entry 7QW4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	35	Right-handed alpha
Helix 2	AA2	A	65	70	Right-handed alpha
Helix 3	AA3	A	86	94	Right-handed alpha
Helix 4	AA4	A	119	124	Right-handed alpha
Helix 5	AA5	A	158	167	Right-handed alpha
Helix 6	AA6	A	168	173	Right-handed 310
Helix 7	AA7	B	212	226	Right-handed alpha
Helix 8	AA8	B	255	262	Right-handed alpha
Helix 9	AA9	B	273	277	Right-handed 310
Helix 10	AB1	B	280	287	Right-handed alpha
Helix 11	AB2	B	311	317	Right-handed alpha
Helix 12	AB3	B	317	325	Right-handed alpha
Helix 13	AB4	B	350	360	Right-handed alpha
Helix 14	AB5	B	361	363	Right-handed 310
Helix 15	AB6	C	405	419	Right-handed alpha
Helix 16	AB7	C	429	433	Right-handed alpha
Helix 17	AB8	C	444	453	Right-handed alpha
Helix 18	AB9	C	454	457	Right-handed 310
Helix 19	AC1	C	475	479	Right-handed 310
Helix 20	AC2	C	505	510	Right-handed alpha
Helix 21	AC3	C	511	518	Right-handed alpha
Helix 22	AC4	C	544	557	Right-handed alpha
Helix 23	AC5	D	598	607	Right-handed alpha
Helix 24	AC6	D	609	614	Right-handed alpha
Helix 25	AC7	D	639	648	Right-handed alpha
Helix 26	AC8	D	665	674	Right-handed alpha
Helix 27	AC9	D	698	703	Right-handed alpha
Helix 28	AD1	D	703	711	Right-handed alpha
Helix 29	AD2	D	737	745	Right-handed alpha
Helix 30	AD3	E	791	806	Right-handed alpha
Helix 31	AD4	E	815	819	Right-handed 310
Helix 32	AD5	E	833	842	Right-handed alpha
Helix 33	AD6	E	858	867	Right-handed alpha
Helix 34	AD7	E	891	896	Right-handed alpha
Helix 35	AD8	E	899	904	Right-handed alpha
Helix 36	AD9	E	930	939	Right-handed alpha
Helix 37	AE1	F	984	999	Right-handed alpha
Helix 38	AE2	F	1008	1012	Right-handed 310
Helix 39	AE3	F	1027	1035	Right-handed alpha
Helix 40	AE4	F	1051	1059	Right-handed alpha
Helix 41	AE5	F	1084	1089	Right-handed alpha
Helix 42	AE6	F	1090	1095	Right-handed alpha
Helix 43	AE7	F	1122	1135	Right-handed alpha
Helix 44	AE8	G	1175	1192	Right-handed alpha
Helix 45	AE9	G	1216	1220	Right-handed 310
Helix 46	AF1	G	1223	1228	Right-handed alpha
Helix 47	AF2	G	1244	1252	Right-handed alpha
Helix 48	AF3	G	1272	1279	Right-handed 310
Helix 49	AF4	G	1285	1290	Right-handed alpha
Helix 50	AF5	G	1317	1322	Right-handed alpha
Helix 51	AF6	G	1323	1328	Right-handed 310
Helix 52	AF7	H	1368	1385	Right-handed alpha
Helix 53	AF8	H	1412	1421	Right-handed alpha
Helix 54	AF9	H	1437	1443	Right-handed alpha
Helix 55	AG1	H	1444	1447	Right-handed 310
Helix 56	AG2	H	1465	1469	Right-handed 310
Helix 57	AG3	H	1470	1475	Right-handed alpha
Helix 58	AG4	H	1476	1483	Right-handed alpha
Helix 59	AG5	H	1508	1519	Right-handed alpha
Helix 60	AG6	I	1563	1574	Right-handed alpha
Helix 61	AG7	I	1602	1613	Right-handed alpha
Helix 62	AG8	I	1630	1638	Right-handed alpha
Helix 63	AG9	I	1663	1668	Right-handed alpha
Helix 64	AH1	I	1668	1676	Right-handed alpha
Helix 65	AH2	I	1702	1711	Right-handed alpha
Helix 66	AH3	J	1756	1772	Right-handed alpha
Helix 67	AH4	J	1795	1807	Right-handed alpha
Helix 68	AH5	J	1823	1831	Right-handed alpha
Helix 69	AH6	J	1851	1855	Right-handed 310
Helix 70	AH7	J	1856	1861	Right-handed alpha
Helix 71	AH8	J	1899	1908	Right-handed alpha
Helix 72	AH9	K	1952	1964	Right-handed alpha
Helix 73	AI1	K	1991	2000	Right-handed alpha
Helix 74	AI2	K	2016	2024	Right-handed alpha
Helix 75	AI3	K	2049	2054	Right-handed alpha
Helix 76	AI4	K	2057	2062	Right-handed alpha
Helix 77	AI5	K	2095	2099	Right-handed 310
Helix 78	AI6	L	2142	2156	Right-handed alpha
Helix 79	AI7	L	2187	2193	Right-handed alpha
Helix 80	AI8	L	2209	2215	Right-handed alpha
Helix 81	AI9	L	2242	2247	Right-handed alpha
Helix 82	AJ1	L	2250	2255	Right-handed alpha
Helix 83	AJ2	L	2282	2290	Right-handed alpha
Helix 84	AJ3	M	2333	2351	Right-handed alpha
Helix 85	AJ4	M	2374	2386	Right-handed alpha
Helix 86	AJ5	M	2402	2411	Right-handed alpha
Helix 87	AJ6	M	2433	2437	Right-handed 310
Helix 88	AJ7	M	2443	2448	Right-handed alpha
Helix 89	AJ8	M	2476	2481	Right-handed alpha
Helix 90	AJ9	N	2527	2541	Right-handed alpha
Helix 91	AK1	N	2569	2579	Right-handed alpha
Helix 92	AK2	N	2595	2605	Right-handed alpha
Helix 93	AK3	N	2628	2633	Right-handed alpha
Helix 94	AK4	N	2634	2639	Right-handed alpha
Helix 95	AK5	N	2667	2680	Right-handed alpha
Helix 96	AK6	O	2720	2734	Right-handed alpha
Helix 97	AK7	O	2746	2748	Right-handed 310
Helix 98	AK8	O	2760	2772	Right-handed alpha
Helix 99	AK9	O	2788	2797	Right-handed alpha
Helix 100	AL1	O	2829	2834	Right-handed alpha
Helix 101	AL2	O	2859	2866	Right-handed alpha
Helix 102	AL3	O	2868	2873	Right-handed alpha
Helix 103	AL4	P	2914	2930	Right-handed alpha
Helix 104	AL5	P	2938	2942	Right-handed 310
Helix 105	AL6	P	2957	2965	Right-handed alpha
Helix 106	AL7	P	2982	2989	Right-handed alpha
Helix 107	AL8	P	3009	3016	Right-handed 310
Helix 108	AL9	P	3051	3053	Right-handed 310
Helix 109	AM1	P	3054	3059	Right-handed alpha
Helix 110	AM2	Q	3112	3121	Right-handed alpha
Helix 111	AM3	Q	3174	3182	Right-handed alpha
Helix 112	AM4	Q	3207	3212	Right-handed alpha
Helix 113	AM5	Q	3245	3254	Right-handed alpha
Helix 114	AM6	Q	3255	3257	Right-handed 310
Helix 115	AM7	R	3299	3316	Right-handed alpha
Helix 116	AM8	R	3323	3328	Right-handed 310
Helix 117	AM9	R	3339	3351	Right-handed alpha
Helix 118	AN1	R	3367	3376	Right-handed alpha
Helix 119	AN2	R	3400	3405	Right-handed alpha
Helix 120	AN3	R	3406	3413	Right-handed alpha
Helix 121	AN4	R	3439	3448	Right-handed alpha
Helix 122	AN5	R	3449	3453	Right-handed 310
Helix 123	AN6	S	3493	3508	Right-handed alpha
Helix 124	AN7	S	3516	3521	Right-handed alpha
Helix 125	AN8	S	3533	3538	Right-handed alpha
Helix 126	AN9	S	3561	3568	Right-handed alpha
Helix 127	AO1	S	3569	3570	Right-handed 310
Helix 128	AO2	S	3571	3576	Right-handed 310
Helix 129	AO3	S	3632	3641	Right-handed alpha
Helix 130	AO4	S	3642	3646	Right-handed 310
Helix 131	AO5	T	3691	3701	Right-handed alpha
Helix 132	AO6	T	3728	3736	Right-handed alpha
Helix 133	AO7	T	3753	3761	Right-handed alpha
Helix 134	AO8	T	3781	3785	Right-handed 310
Helix 135	AO9	T	3786	3791	Right-handed alpha
Helix 136	AP1	T	3823	3825	Right-handed 310
Helix 137	AP2	T	3826	3831	Right-handed alpha

There are 25 sheets in PDB entry 7QW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	6	10	parallel
Strand 3	A	73	79	parallel
Strand 4	A	105	111	parallel
Strand 5	A	135	136	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	6	10	parallel
Strand 3	A	73	79	parallel
Strand 4	A	105	111	parallel
Strand 5	A	141	143	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	234	first strand
Strand 2	B	201	203	parallel
Strand 3	B	267	271	parallel
Strand 4	B	299	304	parallel
Strand 5	B	334	336	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	426	428	first strand
Strand 2	C	392	396	parallel
Strand 3	C	459	463	parallel
Strand 4	C	492	497	parallel
Strand 5	C	523	529	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	653	658	first strand
Strand 2	D	685	690	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	809	813	first strand
Strand 2	E	777	782	parallel
Strand 3	E	845	851	parallel
Strand 4	E	877	883	parallel
Strand 5	E	908	915	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	971	975	first strand
Strand 2	F	1038	1044	parallel
Strand 3	F	1071	1076	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1165	1167	first strand
Strand 2	G	1232	1234	parallel
Strand 3	G	1264	1269	parallel
Strand 4	G	1295	1301	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	1357	1360	first strand
Strand 2	H	1424	1430	parallel
Strand 3	H	1457	1462	parallel
Strand 4	H	1492	1493	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1582	1586	first strand
Strand 2	I	1550	1554	parallel
Strand 3	I	1618	1623	parallel
Strand 4	I	1650	1655	parallel
Strand 5	I	1685	1687	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1775	1778	first strand
Strand 2	J	1743	1747	parallel
Strand 3	J	1810	1816	parallel
Strand 4	J	1846	1848	parallel
Strand 5	J	1879	1880	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1842	1843	first strand
Strand 2	J	1873	1874	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	1936	1937	first strand
Strand 2	K	2003	2009	parallel
Strand 3	K	2036	2041	parallel
Strand 4	K	2067	2073	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2128	2129	first strand
Strand 2	L	2160	2161	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2197	2198	first strand
Strand 2	L	2229	2230	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	2354	2357	first strand
Strand 2	M	2322	2325	parallel
Strand 3	M	2389	2392	parallel
Strand 4	M	2422	2427	parallel
Strand 5	M	2457	2459	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2546	2551	first strand
Strand 2	N	2514	2519	parallel
Strand 3	N	2582	2588	parallel
Strand 4	N	2614	2620	parallel
Strand 5	N	2645	2646	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2546	2551	first strand
Strand 2	N	2514	2519	parallel
Strand 3	N	2582	2588	parallel
Strand 4	N	2614	2620	parallel
Strand 5	N	2650	2652	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	2742	2744	first strand
Strand 2	O	2708	2712	parallel
Strand 3	O	2775	2781	parallel
Strand 4	O	2808	2813	parallel
Strand 5	O	2840	2845	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	2933	2936	first strand
Strand 2	P	2901	2904	parallel
Strand 3	P	2968	2974	parallel
Strand 4	P	3001	3007	parallel
Strand 5	P	3036	3039	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	3126	3130	first strand
Strand 2	Q	3094	3098	parallel
Strand 3	Q	3161	3165	parallel
Strand 4	Q	3193	3196	parallel
Strand 5	Q	3224	3225	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	3318	3322	first strand
Strand 2	R	3286	3290	parallel
Strand 3	R	3354	3360	parallel
Strand 4	R	3387	3392	parallel
Strand 5	R	3419	3424	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3548	3549	first strand
Strand 2	S	3580	3581	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3583	3585	first strand
Strand 2	S	3615	3617	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	3707	3708	first strand
Strand 2	T	3675	3676	parallel
Strand 3	T	3741	3745	parallel
Strand 4	T	3773	3777	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QW4

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QW4