Analysis of interatomic Contacts of Structural Units in PDB entry:
7QWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QWB entry

There are 30 chains in PDB entry 7QWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ILE 3
A
 GLN 5ILE 10
A
 LYS 12ILE 17
A
 ALA 20ILE 24
A
 GLN 26LYS 29
B
 GLU 2ILE 3
B
 GLN 5ILE 10
B
 LYS 12ILE 17
B
 ALA 20ILE 24
B
 GLN 26GLY 30
C
 GLY 1ILE 3
C
 GLN 5ILE 10
C
 LYS 12ILE 17
C
 ALA 20ILE 24
C
 GLN 26LYS 29
D
 GLU 2ILE 3
D
 GLN 5ILE 10
D
 LYS 12ILE 17
D
 ALA 20ILE 24
D
 GLN 26GLY 30
E
 GLY 1ILE 3
E
 GLN 5ILE 10
E
 LYS 12ILE 17
E
 ALA 20ILE 24
E
 GLN 26GLY 30
F
 GLU 2ILE 3
F
 GLN 5ILE 10
F
 LYS 12ILE 17
F
 ALA 20ILE 24
F
 GLN 26LYS 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7QWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 29Right-handed alpha
Helix 2
AA2
B
3 30Right-handed alpha
Helix 3
AA3
C
2 29Right-handed alpha
Helix 4
AA4
D
3 30Right-handed alpha
Helix 5
AA5
E
2 26Right-handed alpha
Helix 6
AA6
E
27 29Right-handed 310
Helix 7
AA7
F
3 28Right-handed alpha
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There are no sheets in PDB entry 7QWB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il