Analysis of interatomic Contacts of Structural Units in PDB entry:
7QWP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QWP entry

There are 8 chains in PDB entry 7QWP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	PRO 323
B	SER 4	ARG 238
C	MET 1	ASP 1341
D	LYS 2	GLY 1376
E	ALA 2	GLN 75
M	MET 15	VAL 477
N	A -34	G 1
T	C -1	T 34

There are129 helices in PDB entry 7QWP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	50	Right-handed alpha
Helix 2	AA2	A	77	86	Right-handed alpha
Helix 3	AA3	A	154	158	Right-handed 310
Helix 4	AA4	A	212	220	Right-handed alpha
Helix 5	AA5	A	265	273	Right-handed alpha
Helix 6	AA6	A	278	283	Right-handed alpha
Helix 7	AA7	A	285	290	Right-handed alpha
Helix 8	AA8	A	296	308	Right-handed alpha
Helix 9	AA9	B	35	50	Right-handed alpha
Helix 10	AB1	B	77	87	Right-handed alpha
Helix 11	AB2	B	111	115	Right-handed 310
Helix 12	AB3	B	212	227	Right-handed alpha
Helix 13	AB4	B	228	233	Right-handed alpha
Helix 14	AB5	C	4	9	Right-handed alpha
Helix 15	AB6	C	28	40	Right-handed alpha
Helix 16	AB7	C	48	56	Right-handed alpha
Helix 17	AB8	C	81	89	Right-handed alpha
Helix 18	AB9	C	137	141	Right-handed 310
Helix 19	AC1	C	207	213	Right-handed alpha
Helix 20	AC2	C	216	224	Right-handed alpha
Helix 21	AC3	C	270	280	Right-handed alpha
Helix 22	AC4	C	289	295	Right-handed alpha
Helix 23	AC5	C	318	326	Right-handed alpha
Helix 24	AC6	C	347	352	Right-handed alpha
Helix 25	AC7	C	358	371	Right-handed alpha
Helix 26	AC8	C	379	390	Right-handed alpha
Helix 27	AC9	C	399	409	Right-handed alpha
Helix 28	AD1	C	421	438	Right-handed alpha
Helix 29	AD2	C	447	449	Right-handed 310
Helix 30	AD3	C	455	481	Right-handed alpha
Helix 31	AD4	C	495	507	Right-handed alpha
Helix 32	AD5	C	520	527	Right-handed alpha
Helix 33	AD6	C	551	555	Right-handed 310
Helix 34	AD7	C	609	613	Right-handed 310
Helix 35	AD8	C	656	660	Right-handed 310
Helix 36	AD9	C	670	674	Right-handed 310
Helix 37	AE1	C	675	687	Right-handed alpha
Helix 38	AE2	C	703	712	Right-handed alpha
Helix 39	AE3	C	820	825	Right-handed alpha
Helix 40	AE4	C	860	864	Right-handed 310
Helix 41	AE5	C	896	906	Right-handed alpha
Helix 42	AE6	C	945	979	Right-handed alpha
Helix 43	AE7	C	985	992	Right-handed alpha
Helix 44	AE8	C	993	999	Right-handed 310
Helix 45	AE9	C	1006	1037	Right-handed alpha
Helix 46	AF1	C	1101	1106	Right-handed alpha
Helix 47	AF2	C	1108	1134	Right-handed alpha
Helix 48	AF3	C	1137	1151	Right-handed alpha
Helix 49	AF4	C	1167	1174	Right-handed alpha
Helix 50	AF5	C	1191	1202	Right-handed alpha
Helix 51	AF6	C	1238	1243	Right-handed alpha
Helix 52	AF7	C	1271	1280	Right-handed alpha
Helix 53	AF8	C	1283	1292	Right-handed alpha
Helix 54	AF9	C	1297	1311	Right-handed alpha
Helix 55	AG1	C	1320	1331	Right-handed alpha
Helix 56	AG2	D	26	33	Right-handed alpha
Helix 57	AG3	D	94	100	Right-handed 310
Helix 58	AG4	D	122	129	Right-handed alpha
Helix 59	AG5	D	131	140	Right-handed alpha
Helix 60	AG6	D	161	173	Right-handed alpha
Helix 61	AG7	D	182	191	Right-handed alpha
Helix 62	AG8	D	193	208	Right-handed alpha
Helix 63	AG9	D	210	215	Right-handed alpha
Helix 64	AH1	D	217	230	Right-handed alpha
Helix 65	AH2	D	233	238	Right-handed 310
Helix 66	AH3	D	246	250	Right-handed 310
Helix 67	AH4	D	266	285	Right-handed alpha
Helix 68	AH5	D	288	308	Right-handed alpha
Helix 69	AH6	D	336	341	Right-handed alpha
Helix 70	AH7	D	371	376	Right-handed alpha
Helix 71	AH8	D	377	388	Right-handed alpha
Helix 72	AH9	D	393	404	Right-handed alpha
Helix 73	AI1	D	405	416	Right-handed alpha
Helix 74	AI2	D	417	419	Right-handed 310
Helix 75	AI3	D	430	432	Right-handed 310
Helix 76	AI4	D	453	458	Right-handed alpha
Helix 77	AI5	D	473	483	Right-handed alpha
Helix 78	AI6	D	503	514	Right-handed alpha
Helix 79	AI7	D	531	538	Right-handed alpha
Helix 80	AI8	D	573	583	Right-handed alpha
Helix 81	AI9	D	589	593	Right-handed 310
Helix 82	AJ1	D	597	613	Right-handed alpha
Helix 83	AJ2	D	614	635	Right-handed alpha
Helix 84	AJ3	D	640	644	Right-handed 310
Helix 85	AJ4	D	648	670	Right-handed alpha
Helix 86	AJ5	D	676	702	Right-handed alpha
Helix 87	AJ6	D	720	729	Right-handed alpha
Helix 88	AJ7	D	733	738	Right-handed alpha
Helix 89	AJ8	D	768	805	Right-handed alpha
Helix 90	AJ9	D	866	876	Right-handed alpha
Helix 91	AK1	D	914	919	Right-handed alpha
Helix 92	AK2	D	1137	1147	Right-handed alpha
Helix 93	AK3	D	1216	1224	Right-handed alpha
Helix 94	AK4	D	1225	1243	Right-handed alpha
Helix 95	AK5	D	1249	1260	Right-handed alpha
Helix 96	AK6	D	1279	1291	Right-handed alpha
Helix 97	AK7	D	1295	1299	Right-handed 310
Helix 98	AK8	D	1310	1316	Right-handed 310
Helix 99	AK9	D	1318	1322	Right-handed 310
Helix 100	AL1	D	1327	1339	Right-handed alpha
Helix 101	AL2	D	1346	1354	Right-handed alpha
Helix 102	AL3	D	1360	1375	Right-handed alpha
Helix 103	AL4	E	7	14	Right-handed alpha
Helix 104	AL5	E	17	33	Right-handed alpha
Helix 105	AL6	E	45	56	Right-handed alpha
Helix 106	AL7	E	62	75	Right-handed alpha
Helix 107	AL8	M	16	28	Right-handed alpha
Helix 108	AL9	M	29	40	Right-handed alpha
Helix 109	AM1	M	121	131	Right-handed alpha
Helix 110	AM2	M	134	147	Right-handed alpha
Helix 111	AM3	M	158	165	Right-handed alpha
Helix 112	AM4	M	171	183	Right-handed alpha
Helix 113	AM5	M	196	206	Right-handed alpha
Helix 114	AM6	M	212	223	Right-handed alpha
Helix 115	AM7	M	223	228	Right-handed alpha
Helix 116	AM8	M	233	240	Right-handed alpha
Helix 117	AM9	M	244	255	Right-handed alpha
Helix 118	AN1	M	259	264	Right-handed 310
Helix 119	AN2	M	301	306	Right-handed alpha
Helix 120	AN3	M	313	351	Right-handed alpha
Helix 121	AN4	M	351	357	Right-handed alpha
Helix 122	AN5	M	358	362	Right-handed 310
Helix 123	AN6	M	366	372	Right-handed alpha
Helix 124	AN7	M	377	385	Right-handed alpha
Helix 125	AN8	M	399	403	Right-handed alpha
Helix 126	AN9	M	410	412	Right-handed 310
Helix 127	AO1	M	417	431	Right-handed alpha
Helix 128	AO2	M	438	450	Right-handed alpha
Helix 129	AO3	M	454	465	Right-handed alpha

There are 37 sheets in PDB entry 7QWP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	24	first strand
Strand 2	A	200	206	anti-parallel
Strand 3	A	183	188	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	105	first strand
Strand 2	A	139	149	anti-parallel
Strand 3	A	53	61	anti-parallel
Strand 4	A	171	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	129	131	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	28	first strand
Strand 2	B	198	207	anti-parallel
Strand 3	B	180	190	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	59	first strand
Strand 2	B	144	150	anti-parallel
Strand 3	B	98	100	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	122	123	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	175	176	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	75	first strand
Strand 2	C	93	105	anti-parallel
Strand 3	C	113	116	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	75	first strand
Strand 2	C	93	105	anti-parallel
Strand 3	C	121	128	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	512	514	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	529	531	parallel
Strand 4	C	573	574	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	156	first strand
Strand 2	C	175	177	anti-parallel
Strand 3	C	184	185	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	239	first strand
Strand 2	C	285	286	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	595	anti-parallel
Strand 3	C	598	606	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	595	anti-parallel
Strand 3	C	652	653	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	616	617	first strand
Strand 2	C	634	637	anti-parallel
Strand 3	C	642	645	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	785	anti-parallel
Strand 3	C	768	769	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	723	727	first strand
Strand 2	C	731	735	anti-parallel
Strand 3	C	748	752	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	755	758	first strand
Strand 2	C	764	766	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1066	1067	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	798	804	anti-parallel
Strand 4	C	1096	1098	parallel
Strand 5	C	815	819	anti-parallel
Strand 6	C	1075	1080	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1066	1067	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	1209	1210	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	830	839	first strand
Strand 2	C	1048	1058	anti-parallel
Strand 3	C	925	935	anti-parallel
Strand 4	C	876	878	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1336	first strand
Strand 2	D	23	24	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	102	105	parallel
Strand 3	D	242	244	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	148	first strand
Strand 2	D	177	179	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	353	357	first strand
Strand 2	D	447	449	parallel
Strand 3	D	365	369	anti-parallel
Strand 4	D	434	442	parallel
Strand 5	D	421	424	anti-parallel
Strand 6	D	465	469	anti-parallel
Strand 7	D	353	357	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	556	first strand
Strand 2	D	564	572	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	825	826	first strand
Strand 2	D	831	833	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	965	967	first strand
Strand 2	D	973	975	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1002	1003	first strand
Strand 2	D	1018	1019	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1265	1266	first strand
Strand 2	D	1302	1303	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	286	289	first strand
Strand 2	M	276	279	anti-parallel
Strand 3	M	389	392	parallel
Strand 4	M	395	398	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	406	408	first strand
Strand 2	M	414	416	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QWP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QWP