Analysis of interatomic Contacts of Structural Units in PDB entry:
7QWZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QWZ entry

There are 2 chains in PDB entry 7QWZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	PRO 658
A	MET 1	PRO 658

There are 35 helices in PDB entry 7QWZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	1	7	Right-handed alpha
Helix 2	AA2	B	90	101	Right-handed alpha
Helix 3	AA3	B	107	119	Right-handed alpha
Helix 4	AA4	B	124	140	Right-handed alpha
Helix 5	AA5	B	173	177	Right-handed alpha
Helix 6	AA6	B	208	220	Right-handed alpha
Helix 7	AA7	B	228	232	Right-handed 310
Helix 8	AA8	B	257	273	Right-handed alpha
Helix 9	AA9	B	274	289	Right-handed alpha
Helix 10	AB1	B	296	304	Right-handed 310
Helix 11	AB2	B	337	346	Right-handed alpha
Helix 12	AB3	B	349	369	Right-handed alpha
Helix 13	AB4	B	382	387	Right-handed alpha
Helix 14	AB5	B	396	409	Right-handed alpha
Helix 15	AB6	B	444	449	Right-handed alpha
Helix 16	AB7	B	511	526	Right-handed alpha
Helix 17	AB8	B	552	557	Right-handed 310
Helix 18	AB9	A	2	8	Right-handed alpha
Helix 19	AC1	A	92	100	Right-handed alpha
Helix 20	AC2	A	107	119	Right-handed alpha
Helix 21	AC3	A	124	140	Right-handed alpha
Helix 22	AC4	A	161	165	Right-handed alpha
Helix 23	AC5	A	208	219	Right-handed alpha
Helix 24	AC6	A	258	273	Right-handed alpha
Helix 25	AC7	A	275	288	Right-handed alpha
Helix 26	AC8	A	296	304	Right-handed 310
Helix 27	AC9	A	321	325	Right-handed 310
Helix 28	AD1	A	337	346	Right-handed alpha
Helix 29	AD2	A	349	369	Right-handed alpha
Helix 30	AD3	A	382	387	Right-handed alpha
Helix 31	AD4	A	396	409	Right-handed alpha
Helix 32	AD5	A	426	431	Right-handed alpha
Helix 33	AD6	A	512	525	Right-handed alpha
Helix 34	AD7	A	552	557	Right-handed 310
Helix 35	AD8	A	620	630	Right-handed alpha

There are 21 sheets in PDB entry 7QWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	46	first strand
Strand 2	B	37	39	anti-parallel
Strand 3	B	587	595	anti-parallel
Strand 4	B	25	34	anti-parallel
Strand 5	B	492	498	first strand

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	292	first strand
Strand 2	B	49	59	anti-parallel
Strand 3	B	25	34	anti-parallel
Strand 4	B	587	595	anti-parallel
Strand 5	B	599	602	first strand

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	69	first strand
Strand 2	B	307	312	parallel
Strand 3	B	421	422	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	145	first strand
Strand 2	B	171	172	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	153	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	434	440	anti-parallel
Strand 4	B	461	466	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	202	first strand
Strand 2	B	242	244	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	414	first strand
Strand 2	B	637	639	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	506	509	first strand
Strand 2	B	564	567	anti-parallel
Strand 3	B	530	533	anti-parallel
Strand 4	B	539	541	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	527	528	first strand
Strand 2	B	572	573	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	643	644	first strand
Strand 2	B	655	656	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	611	614	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	37	39	anti-parallel
Strand 3	A	588	603	anti-parallel
Strand 4	A	492	497	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	292	first strand
Strand 2	A	49	59	anti-parallel
Strand 3	A	25	34	anti-parallel
Strand 4	A	588	603	anti-parallel
Strand 5	A	606	607	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	69	first strand
Strand 2	A	307	312	parallel
Strand 3	A	421	422	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	315	316	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	145	first strand
Strand 2	A	171	172	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	153	first strand
Strand 2	A	157	160	anti-parallel
Strand 3	A	434	440	anti-parallel
Strand 4	A	461	466	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	186	first strand
Strand 2	A	240	244	parallel
Strand 3	A	200	202	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	509	first strand
Strand 2	A	564	567	anti-parallel
Strand 3	A	530	533	anti-parallel
Strand 4	A	539	541	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	527	528	first strand
Strand 2	A	572	573	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	644	645	first strand
Strand 2	A	654	655	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QWZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QWZ