Analysis of interatomic Contacts of Structural Units in PDB entry:
7QX0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QX0 entry

There are 4 chains in PDB entry 7QX0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 36	GLY 455
B	SER 7	GLY 455
C	ILE 36	ALA 453
D	SER 7	GLY 455

There are 71 helices in PDB entry 7QX0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	70	83	Right-handed alpha
Helix 2	AA2	A	94	108	Right-handed alpha
Helix 3	AA3	A	121	139	Right-handed alpha
Helix 4	AA4	A	158	165	Right-handed alpha
Helix 5	AA5	A	188	193	Right-handed alpha
Helix 6	AA6	A	197	214	Right-handed alpha
Helix 7	AA7	A	217	219	Right-handed 310
Helix 8	AA8	A	241	253	Right-handed alpha
Helix 9	AA9	A	273	278	Right-handed alpha
Helix 10	AB1	A	288	292	Right-handed 310
Helix 11	AB2	A	305	313	Right-handed alpha
Helix 12	AB3	A	327	344	Right-handed alpha
Helix 13	AB4	A	345	353	Right-handed alpha
Helix 14	AB5	A	353	365	Right-handed alpha
Helix 15	AB6	A	366	368	Right-handed 310
Helix 16	AB7	A	398	412	Right-handed alpha
Helix 17	AB8	A	432	455	Right-handed alpha
Helix 18	AB9	B	8	19	Right-handed alpha
Helix 19	AC1	B	27	33	Right-handed alpha
Helix 20	AC2	B	69	80	Right-handed alpha
Helix 21	AC3	B	95	107	Right-handed alpha
Helix 22	AC4	B	120	139	Right-handed alpha
Helix 23	AC5	B	158	165	Right-handed alpha
Helix 24	AC6	B	167	172	Right-handed alpha
Helix 25	AC7	B	188	193	Right-handed alpha
Helix 26	AC8	B	197	217	Right-handed alpha
Helix 27	AC9	B	241	253	Right-handed alpha
Helix 28	AD1	B	273	279	Right-handed alpha
Helix 29	AD2	B	288	292	Right-handed 310
Helix 30	AD3	B	305	312	Right-handed alpha
Helix 31	AD4	B	327	344	Right-handed alpha
Helix 32	AD5	B	345	353	Right-handed alpha
Helix 33	AD6	B	353	365	Right-handed alpha
Helix 34	AD7	B	366	368	Right-handed 310
Helix 35	AD8	B	397	412	Right-handed alpha
Helix 36	AD9	B	432	455	Right-handed alpha
Helix 37	AE1	C	69	83	Right-handed alpha
Helix 38	AE2	C	94	106	Right-handed alpha
Helix 39	AE3	C	120	139	Right-handed alpha
Helix 40	AE4	C	158	165	Right-handed alpha
Helix 41	AE5	C	167	173	Right-handed alpha
Helix 42	AE6	C	188	193	Right-handed alpha
Helix 43	AE7	C	197	207	Right-handed alpha
Helix 44	AE8	C	207	217	Right-handed alpha
Helix 45	AE9	C	241	253	Right-handed alpha
Helix 46	AF1	C	273	278	Right-handed alpha
Helix 47	AF2	C	289	293	Right-handed 310
Helix 48	AF3	C	305	313	Right-handed alpha
Helix 49	AF4	C	327	344	Right-handed alpha
Helix 50	AF5	C	345	353	Right-handed alpha
Helix 51	AF6	C	353	362	Right-handed alpha
Helix 52	AF7	C	363	368	Right-handed 310
Helix 53	AF8	C	398	413	Right-handed alpha
Helix 54	AF9	C	432	453	Right-handed alpha
Helix 55	AG1	D	8	18	Right-handed alpha
Helix 56	AG2	D	57	62	Right-handed alpha
Helix 57	AG3	D	69	80	Right-handed alpha
Helix 58	AG4	D	95	107	Right-handed alpha
Helix 59	AG5	D	120	139	Right-handed alpha
Helix 60	AG6	D	158	165	Right-handed alpha
Helix 61	AG7	D	167	172	Right-handed alpha
Helix 62	AG8	D	188	193	Right-handed alpha
Helix 63	AG9	D	197	217	Right-handed alpha
Helix 64	AH1	D	241	253	Right-handed alpha
Helix 65	AH2	D	273	278	Right-handed alpha
Helix 66	AH3	D	305	313	Right-handed alpha
Helix 67	AH4	D	327	344	Right-handed alpha
Helix 68	AH5	D	345	353	Right-handed alpha
Helix 69	AH6	D	354	366	Right-handed alpha
Helix 70	AH7	D	397	412	Right-handed alpha
Helix 71	AH8	D	432	453	Right-handed alpha

There are 17 sheets in PDB entry 7QX0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	41	first strand
Strand 2	A	44	47	anti-parallel
Strand 3	A	52	55	anti-parallel
Strand 4	A	414	415	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	118	first strand
Strand 2	A	299	304	anti-parallel
Strand 3	A	284	287	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	184	first strand
Strand 2	A	146	150	parallel
Strand 3	A	221	226	parallel
Strand 4	A	256	259	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	377	first strand
Strand 2	A	380	385	anti-parallel
Strand 3	A	422	425	anti-parallel
Strand 4	A	417	419	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	415	first strand
Strand 2	B	52	55	parallel
Strand 3	B	44	47	anti-parallel
Strand 4	B	35	41	anti-parallel
Strand 5	C	92	93	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	118	first strand
Strand 2	B	299	304	anti-parallel
Strand 3	B	284	287	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	184	first strand
Strand 2	B	146	150	parallel
Strand 3	B	221	226	parallel
Strand 4	B	256	259	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	377	first strand
Strand 2	B	380	385	anti-parallel
Strand 3	B	422	425	anti-parallel
Strand 4	B	417	419	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	41	first strand
Strand 2	C	44	47	anti-parallel
Strand 3	C	52	55	anti-parallel
Strand 4	C	414	415	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	118	first strand
Strand 2	C	299	304	anti-parallel
Strand 3	C	284	287	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	184	first strand
Strand 2	C	146	150	parallel
Strand 3	C	221	226	parallel
Strand 4	C	256	259	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	377	first strand
Strand 2	C	380	382	anti-parallel
Strand 3	C	422	425	anti-parallel
Strand 4	C	417	419	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	41	first strand
Strand 2	D	44	47	anti-parallel
Strand 3	D	52	55	anti-parallel
Strand 4	D	414	415	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	112	118	first strand
Strand 2	D	299	304	anti-parallel
Strand 3	D	284	287	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	184	first strand
Strand 2	D	146	150	parallel
Strand 3	D	221	226	parallel
Strand 4	D	256	259	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	231	first strand
Strand 2	D	235	236	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	371	377	first strand
Strand 2	D	380	385	anti-parallel
Strand 3	D	422	425	anti-parallel
Strand 4	D	417	419	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QX0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QX0