Analysis of interatomic Contacts of Structural Units in PDB entry:
7QYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QYG entry

There are 4 chains in PDB entry 7QYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 70GLU 459
B
GLU 71GLU 459
C
ARG 69GLU 459
D
GLU 71GLU 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7QYG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
120 137Right-handed alpha
Helix 2
AA2
A
158 165Right-handed alpha
Helix 3
AA3
A
197 215Right-handed alpha
Helix 4
AA4
A
230 234Right-handed 310
Helix 5
AA5
A
241 253Right-handed alpha
Helix 6
AA6
A
274 279Right-handed alpha
Helix 7
AA7
A
305 313Right-handed alpha
Helix 8
AA8
A
328 331Right-handed 310
Helix 9
AA9
A
333 338Right-handed alpha
Helix 10
AB1
A
338 343Right-handed alpha
Helix 11
AB2
A
345 353Right-handed alpha
Helix 12
AB3
A
353 363Right-handed alpha
Helix 13
AB4
A
402 411Right-handed alpha
Helix 14
AB5
A
433 454Right-handed alpha
Helix 15
AB6
B
120 140Right-handed alpha
Helix 16
AB7
B
158 165Right-handed alpha
Helix 17
AB8
B
197 208Right-handed alpha
Helix 18
AB9
B
209 217Right-handed alpha
Helix 19
AC1
B
243 253Right-handed alpha
Helix 20
AC2
B
274 279Right-handed alpha
Helix 21
AC3
B
290 293Right-handed 310
Helix 22
AC4
B
305 315Right-handed alpha
Helix 23
AC5
B
320 324Right-handed 310
Helix 24
AC6
B
327 344Right-handed alpha
Helix 25
AC7
B
345 353Right-handed alpha
Helix 26
AC8
B
353 363Right-handed alpha
Helix 27
AC9
B
402 405Right-handed 310
Helix 28
AD1
B
406 411Right-handed alpha
Helix 29
AD2
B
432 453Right-handed alpha
Helix 30
AD3
C
121 139Right-handed alpha
Helix 31
AD4
C
158 165Right-handed alpha
Helix 32
AD5
C
167 172Right-handed alpha
Helix 33
AD6
C
188 193Right-handed alpha
Helix 34
AD7
C
197 202Right-handed alpha
Helix 35
AD8
C
202 215Right-handed alpha
Helix 36
AD9
C
241 253Right-handed alpha
Helix 37
AE1
C
273 278Right-handed alpha
Helix 38
AE2
C
304 312Right-handed alpha
Helix 39
AE3
C
327 343Right-handed alpha
Helix 40
AE4
C
345 352Right-handed alpha
Helix 41
AE5
C
354 362Right-handed alpha
Helix 42
AE6
C
399 411Right-handed alpha
Helix 43
AE7
C
433 448Right-handed alpha
Helix 44
AE8
D
120 139Right-handed alpha
Helix 45
AE9
D
158 163Right-handed alpha
Helix 46
AF1
D
188 193Right-handed alpha
Helix 47
AF2
D
197 214Right-handed alpha
Helix 48
AF3
D
241 253Right-handed alpha
Helix 49
AF4
D
273 279Right-handed alpha
Helix 50
AF5
D
304 314Right-handed alpha
Helix 51
AF6
D
327 344Right-handed alpha
Helix 52
AF7
D
345 352Right-handed alpha
Helix 53
AF8
D
353 363Right-handed alpha
Helix 54
AF9
D
402 411Right-handed alpha
Helix 55
AG1
D
432 454Right-handed alpha
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There are 12 sheets in PDB entry 7QYG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
112 118first strand
Strand 2
A
299 304anti-parallel
Strand 3
A
284 288anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
181 184first strand
Strand 2
A
146 150parallel
Strand 3
A
221 226parallel
Strand 4
A
258 259parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
375 376first strand
Strand 2
A
381 384anti-parallel
Strand 3
A
422 425anti-parallel
Strand 4
A
417 418anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
112 118first strand
Strand 2
B
299 304anti-parallel
Strand 3
B
284 288anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
181 182first strand
Strand 2
B
146 148parallel
Strand 3
B
221 225parallel
Strand 4
B
256 258parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
371 376first strand
Strand 2
B
381 385anti-parallel
Strand 3
B
422 425anti-parallel
Strand 4
B
417 418anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
114 118first strand
Strand 2
C
299 303anti-parallel
Strand 3
C
284 286anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
183 184first strand
Strand 2
C
146 150parallel
Strand 3
C
221 225parallel
Strand 4
C
256 258parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
375 377first strand
Strand 2
C
380 382anti-parallel
Strand 3
C
423 425anti-parallel
Strand 4
C
417 418anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
114 117first strand
Strand 2
D
299 303anti-parallel
Strand 3
D
286 288anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
181 184first strand
Strand 2
D
146 150parallel
Strand 3
D
221 226parallel
Strand 4
D
257 259parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
374 376first strand
Strand 2
D
381 384anti-parallel
Strand 3
D
422 425anti-parallel
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