Analysis of interatomic Contacts of Structural Units in PDB entry:
7QZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QZJ entry

There are 2 chains in PDB entry 7QZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 16LEU 440
B
 THR 15LEU 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7QZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 27Right-handed alpha
Helix 2
AA2
A
77 91Right-handed alpha
Helix 3
AA3
A
101 115Right-handed alpha
Helix 4
AA4
A
127 146Right-handed alpha
Helix 5
AA5
A
164 171Right-handed alpha
Helix 6
AA6
A
173 177Right-handed 310
Helix 7
AA7
A
194 198Right-handed 310
Helix 8
AA8
A
200 217Right-handed alpha
Helix 9
AA9
A
241 254Right-handed alpha
Helix 10
AB1
A
273 277Right-handed 310
Helix 11
AB2
A
288 293Right-handed 310
Helix 12
AB3
A
304 311Right-handed alpha
Helix 13
AB4
A
312 314Right-handed 310
Helix 14
AB5
A
329 347Right-handed alpha
Helix 15
AB6
A
347 364Right-handed alpha
Helix 16
AB7
A
365 369Right-handed 310
Helix 17
AB8
A
388 402Right-handed alpha
Helix 18
AB9
A
422 439Right-handed alpha
Helix 19
AC1
B
16 27Right-handed alpha
Helix 20
AC2
B
77 91Right-handed alpha
Helix 21
AC3
B
102 115Right-handed alpha
Helix 22
AC4
B
127 146Right-handed alpha
Helix 23
AC5
B
164 171Right-handed alpha
Helix 24
AC6
B
173 177Right-handed 310
Helix 25
AC7
B
194 198Right-handed 310
Helix 26
AC8
B
200 217Right-handed alpha
Helix 27
AC9
B
241 254Right-handed alpha
Helix 28
AD1
B
273 277Right-handed 310
Helix 29
AD2
B
289 293Right-handed 310
Helix 30
AD3
B
305 311Right-handed alpha
Helix 31
AD4
B
312 314Right-handed 310
Helix 32
AD5
B
329 347Right-handed alpha
Helix 33
AD6
B
347 364Right-handed alpha
Helix 34
AD7
B
365 369Right-handed 310
Helix 35
AD8
B
388 402Right-handed alpha
Helix 36
AD9
B
422 439Right-handed alpha
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There are 8 sheets in PDB entry 7QZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
B
119 125parallel
Strand 3
B
299 304anti-parallel
Strand 4
B
284 287anti-parallel
Strand 5
B
256 261parallel
Strand 6
B
223 226parallel
Strand 7
B
153 156parallel
Strand 8
B
186 189parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 405first strand
Strand 2
A
60 63parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
44 49anti-parallel
Strand 5
B
100 101parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
153 156parallel
Strand 3
A
223 226parallel
Strand 4
A
256 260parallel
Strand 5
A
284 287parallel
Strand 6
A
299 303anti-parallel
Strand 7
A
121 125anti-parallel
Strand 8
B
28 29parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
236 237anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
381 386anti-parallel
Strand 3
A
412 415anti-parallel
Strand 4
A
407 409anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
52 55anti-parallel
Strand 3
B
60 63anti-parallel
Strand 4
B
404 405parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
236 237anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 378first strand
Strand 2
B
381 386anti-parallel
Strand 3
B
412 415anti-parallel
Strand 4
B
407 409anti-parallel
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