Analysis of interatomic Contacts of Structural Units in PDB entry:
7QZQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QZQ entry

There are 2 chains in PDB entry 7QZQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 272	ASP 615
B	GLU 272	PRO 613

There are 4 helices in PDB entry 7QZQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	293	295	Right-handed 310
Helix 2	AA2	A	341	347	Right-handed alpha
Helix 3	AA3	A	605	609	Right-handed 310
Helix 4	AA4	B	605	609	Right-handed 310

There are 18 sheets in PDB entry 7QZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	312	first strand
Strand 2	A	297	302	anti-parallel
Strand 3	A	274	280	anti-parallel
Strand 4	A	598	604	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	328	first strand
Strand 2	A	334	339	anti-parallel
Strand 3	A	352	360	anti-parallel
Strand 4	A	364	373	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	379	383	first strand
Strand 2	A	386	390	anti-parallel
Strand 3	A	406	410	anti-parallel
Strand 4	A	415	419	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	393	396	first strand
Strand 2	A	399	402	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	434	first strand
Strand 2	A	437	441	anti-parallel
Strand 3	A	462	466	anti-parallel
Strand 4	A	471	475	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	446	first strand
Strand 2	A	456	458	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	480	483	first strand
Strand 2	A	500	503	anti-parallel
Strand 3	A	512	513	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	490	first strand
Strand 2	A	493	497	anti-parallel
Strand 3	A	517	521	anti-parallel
Strand 4	A	526	530	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	547	550	first strand
Strand 2	A	553	557	anti-parallel
Strand 3	A	572	577	anti-parallel
Strand 4	A	582	588	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	312	first strand
Strand 2	B	297	302	anti-parallel
Strand 3	B	274	280	anti-parallel
Strand 4	B	598	604	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	328	first strand
Strand 2	B	334	339	anti-parallel
Strand 3	B	352	361	anti-parallel
Strand 4	B	364	373	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	379	383	first strand
Strand 2	B	386	390	anti-parallel
Strand 3	B	406	410	anti-parallel
Strand 4	B	415	418	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	393	396	first strand
Strand 2	B	399	402	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	434	first strand
Strand 2	B	437	441	anti-parallel
Strand 3	B	462	466	anti-parallel
Strand 4	B	471	474	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	446	first strand
Strand 2	B	456	458	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	480	483	first strand
Strand 2	B	500	503	anti-parallel
Strand 3	B	512	513	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	486	490	first strand
Strand 2	B	493	497	anti-parallel
Strand 3	B	517	521	anti-parallel
Strand 4	B	526	529	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	547	550	first strand
Strand 2	B	553	559	anti-parallel
Strand 3	B	570	577	anti-parallel
Strand 4	B	582	588	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QZQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QZQ