Analysis of interatomic Contacts of Structural Units in PDB entry:
7R04

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R04 entry

There are 2 chains in PDB entry 7R04 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 5	PRO 2723
B	ARG 5	GLY 1219

There are248 helices in PDB entry 7R04. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	19	Right-handed alpha
Helix 2	AA2	A	19	24	Right-handed alpha
Helix 3	AA3	A	33	50	Right-handed alpha
Helix 4	AA4	A	51	68	Right-handed alpha
Helix 5	AA5	A	72	96	Right-handed alpha
Helix 6	AA6	A	106	120	Right-handed alpha
Helix 7	AA7	A	127	164	Right-handed alpha
Helix 8	AA8	A	171	177	Right-handed alpha
Helix 9	AA9	A	178	182	Right-handed 310
Helix 10	AB1	A	186	200	Right-handed alpha
Helix 11	AB2	A	205	227	Right-handed alpha
Helix 12	AB3	A	229	235	Right-handed alpha
Helix 13	AB4	A	239	258	Right-handed alpha
Helix 14	AB5	A	260	276	Right-handed alpha
Helix 15	AB6	A	277	285	Right-handed alpha
Helix 16	AB7	A	293	308	Right-handed alpha
Helix 17	AB8	A	313	332	Right-handed alpha
Helix 18	AB9	A	340	349	Right-handed alpha
Helix 19	AC1	A	350	358	Right-handed alpha
Helix 20	AC2	A	372	387	Right-handed alpha
Helix 21	AC3	A	391	399	Right-handed alpha
Helix 22	AC4	A	403	420	Right-handed alpha
Helix 23	AC5	A	429	434	Right-handed alpha
Helix 24	AC6	A	436	452	Right-handed alpha
Helix 25	AC7	A	488	503	Right-handed alpha
Helix 26	AC8	A	504	508	Right-handed 310
Helix 27	AC9	A	520	531	Right-handed alpha
Helix 28	AD1	A	538	553	Right-handed alpha
Helix 29	AD2	A	556	562	Right-handed 310
Helix 30	AD3	A	565	588	Right-handed alpha
Helix 31	AD4	A	592	615	Right-handed alpha
Helix 32	AD5	A	679	695	Right-handed alpha
Helix 33	AD6	A	699	721	Right-handed alpha
Helix 34	AD7	A	734	747	Right-handed alpha
Helix 35	AD8	A	751	765	Right-handed alpha
Helix 36	AD9	A	770	793	Right-handed alpha
Helix 37	AE1	A	831	848	Right-handed alpha
Helix 38	AE2	A	849	851	Right-handed 310
Helix 39	AE3	A	890	903	Right-handed alpha
Helix 40	AE4	A	909	924	Right-handed alpha
Helix 41	AE5	A	926	928	Right-handed 310
Helix 42	AE6	A	929	944	Right-handed alpha
Helix 43	AE7	A	954	974	Right-handed alpha
Helix 44	AE8	A	979	984	Right-handed alpha
Helix 45	AE9	A	988	1001	Right-handed alpha
Helix 46	AF1	A	1005	1025	Right-handed alpha
Helix 47	AF2	A	1033	1046	Right-handed alpha
Helix 48	AF3	A	1047	1049	Right-handed 310
Helix 49	AF4	A	1062	1081	Right-handed alpha
Helix 50	AF5	A	1094	1119	Right-handed alpha
Helix 51	AF6	A	1135	1156	Right-handed alpha
Helix 52	AF7	A	1160	1164	Right-handed 310
Helix 53	AF8	A	1172	1188	Right-handed alpha
Helix 54	AF9	A	1195	1214	Right-handed alpha
Helix 55	AG1	A	1221	1231	Right-handed alpha
Helix 56	AG2	A	1232	1234	Right-handed 310
Helix 57	AG3	A	1235	1250	Right-handed alpha
Helix 58	AG4	A	1252	1268	Right-handed alpha
Helix 59	AG5	A	1279	1293	Right-handed alpha
Helix 60	AG6	A	1293	1316	Right-handed alpha
Helix 61	AG7	A	1331	1353	Right-handed alpha
Helix 62	AG8	A	1354	1356	Right-handed 310
Helix 63	AG9	A	1358	1376	Right-handed alpha
Helix 64	AH1	A	1379	1392	Right-handed alpha
Helix 65	AH2	A	1392	1399	Right-handed alpha
Helix 66	AH3	A	1411	1430	Right-handed alpha
Helix 67	AH4	A	1442	1450	Right-handed alpha
Helix 68	AH5	A	1450	1463	Right-handed alpha
Helix 69	AH6	A	1479	1493	Right-handed alpha
Helix 70	AH7	A	1493	1503	Right-handed alpha
Helix 71	AH8	A	1513	1526	Right-handed alpha
Helix 72	AH9	A	1544	1555	Right-handed alpha
Helix 73	AI1	A	1560	1569	Right-handed alpha
Helix 74	AI2	A	1595	1611	Right-handed alpha
Helix 75	AI3	A	1628	1632	Right-handed 310
Helix 76	AI4	A	1634	1641	Right-handed alpha
Helix 77	AI5	A	1646	1652	Right-handed alpha
Helix 78	AI6	A	1662	1672	Right-handed alpha
Helix 79	AI7	A	1674	1679	Right-handed 310
Helix 80	AI8	A	1690	1697	Right-handed 310
Helix 81	AI9	A	1706	1712	Right-handed alpha
Helix 82	AJ1	A	1795	1814	Right-handed alpha
Helix 83	AJ2	A	1825	1828	Right-handed 310
Helix 84	AJ3	A	1829	1842	Right-handed alpha
Helix 85	AJ4	A	1845	1863	Right-handed alpha
Helix 86	AJ5	A	1883	1898	Right-handed alpha
Helix 87	AJ6	A	1901	1914	Right-handed alpha
Helix 88	AJ7	A	1917	1929	Right-handed alpha
Helix 89	AJ8	A	1930	1933	Right-handed 310
Helix 90	AJ9	A	1934	1939	Right-handed alpha
Helix 91	AK1	A	1943	1964	Right-handed alpha
Helix 92	AK2	A	1967	1980	Right-handed alpha
Helix 93	AK3	A	1985	1999	Right-handed alpha
Helix 94	AK4	A	2004	2020	Right-handed alpha
Helix 95	AK5	A	2021	2039	Right-handed alpha
Helix 96	AK6	A	2040	2043	Right-handed 310
Helix 97	AK7	A	2053	2067	Right-handed alpha
Helix 98	AK8	A	2074	2088	Right-handed alpha
Helix 99	AK9	A	2094	2115	Right-handed alpha
Helix 100	AL1	A	2122	2136	Right-handed alpha
Helix 101	AL2	A	2137	2145	Right-handed alpha
Helix 102	AL3	A	2151	2159	Right-handed alpha
Helix 103	AL4	A	2180	2196	Right-handed alpha
Helix 104	AL5	A	2204	2217	Right-handed alpha
Helix 105	AL6	A	2222	2235	Right-handed alpha
Helix 106	AL7	A	2239	2260	Right-handed alpha
Helix 107	AL8	A	2263	2281	Right-handed alpha
Helix 108	AL9	A	2282	2284	Right-handed 310
Helix 109	AM1	A	2289	2304	Right-handed alpha
Helix 110	AM2	A	2306	2327	Right-handed alpha
Helix 111	AM3	A	2328	2333	Right-handed alpha
Helix 112	AM4	A	2334	2344	Right-handed alpha
Helix 113	AM5	A	2346	2358	Right-handed alpha
Helix 114	AM6	A	2364	2374	Right-handed alpha
Helix 115	AM7	A	2375	2379	Right-handed 310
Helix 116	AM8	A	2381	2403	Right-handed alpha
Helix 117	AM9	A	2414	2421	Right-handed alpha
Helix 118	AN1	A	2591	2609	Right-handed alpha
Helix 119	AN2	A	2611	2629	Right-handed alpha
Helix 120	AN3	A	2632	2635	Right-handed 310
Helix 121	AN4	A	2636	2651	Right-handed alpha
Helix 122	AN5	A	2653	2670	Right-handed alpha
Helix 123	AN6	A	2673	2677	Right-handed 310
Helix 124	AN7	A	2678	2679	Right-handed 310
Helix 125	AN8	A	2680	2685	Right-handed alpha
Helix 126	AN9	A	2706	2722	Right-handed alpha
Helix 127	AO1	B	6	24	Right-handed alpha
Helix 128	AO2	B	33	50	Right-handed alpha
Helix 129	AO3	B	51	68	Right-handed alpha
Helix 130	AO4	B	72	97	Right-handed alpha
Helix 131	AO5	B	106	111	Right-handed alpha
Helix 132	AO6	B	113	123	Right-handed alpha
Helix 133	AO7	B	124	126	Right-handed 310
Helix 134	AO8	B	130	149	Right-handed alpha
Helix 135	AO9	B	150	163	Right-handed alpha
Helix 136	AP1	B	171	181	Right-handed alpha
Helix 137	AP2	B	186	201	Right-handed alpha
Helix 138	AP3	B	205	225	Right-handed alpha
Helix 139	AP4	B	227	237	Right-handed alpha
Helix 140	AP5	B	239	257	Right-handed alpha
Helix 141	AP6	B	259	277	Right-handed alpha
Helix 142	AP7	B	279	285	Right-handed alpha
Helix 143	AP8	B	292	309	Right-handed alpha
Helix 144	AP9	B	313	331	Right-handed alpha
Helix 145	AQ1	B	332	334	Right-handed 310
Helix 146	AQ2	B	338	350	Right-handed alpha
Helix 147	AQ3	B	372	387	Right-handed alpha
Helix 148	AQ4	B	391	399	Right-handed alpha
Helix 149	AQ5	B	403	420	Right-handed alpha
Helix 150	AQ6	B	431	435	Right-handed 310
Helix 151	AQ7	B	436	452	Right-handed alpha
Helix 152	AQ8	B	487	503	Right-handed alpha
Helix 153	AQ9	B	520	533	Right-handed alpha
Helix 154	AR1	B	538	553	Right-handed alpha
Helix 155	AR2	B	556	561	Right-handed alpha
Helix 156	AR3	B	566	588	Right-handed alpha
Helix 157	AR4	B	592	615	Right-handed alpha
Helix 158	AR5	B	677	696	Right-handed alpha
Helix 159	AR6	B	699	721	Right-handed alpha
Helix 160	AR7	B	728	732	Right-handed 310
Helix 161	AR8	B	734	745	Right-handed alpha
Helix 162	AR9	B	751	765	Right-handed alpha
Helix 163	AS1	B	770	793	Right-handed alpha
Helix 164	AS2	B	831	847	Right-handed alpha
Helix 165	AS3	B	848	850	Right-handed 310
Helix 166	AS4	B	890	904	Right-handed alpha
Helix 167	AS5	B	907	923	Right-handed alpha
Helix 168	AS6	B	929	945	Right-handed alpha
Helix 169	AS7	B	954	973	Right-handed alpha
Helix 170	AS8	B	979	986	Right-handed alpha
Helix 171	AS9	B	988	1003	Right-handed alpha
Helix 172	AT1	B	1005	1025	Right-handed alpha
Helix 173	AT2	B	1034	1048	Right-handed alpha
Helix 174	AT3	B	1062	1080	Right-handed alpha
Helix 175	AT4	B	1094	1119	Right-handed alpha
Helix 176	AT5	B	1135	1156	Right-handed alpha
Helix 177	AT6	B	1160	1165	Right-handed alpha
Helix 178	AT7	B	1166	1170	Right-handed 310
Helix 179	AT8	B	1172	1189	Right-handed alpha
Helix 180	AT9	B	1221	1229	Right-handed alpha
Helix 181	AU1	B	1232	1234	Right-handed 310
Helix 182	AU2	B	1235	1247	Right-handed alpha
Helix 183	AU3	B	1252	1267	Right-handed alpha
Helix 184	AU4	B	1279	1310	Right-handed alpha
Helix 185	AU5	B	1331	1353	Right-handed alpha
Helix 186	AU6	B	1354	1357	Right-handed 310
Helix 187	AU7	B	1358	1376	Right-handed alpha
Helix 188	AU8	B	1380	1392	Right-handed alpha
Helix 189	AU9	B	1392	1399	Right-handed alpha
Helix 190	AV1	B	1411	1431	Right-handed alpha
Helix 191	AV2	B	1440	1442	Right-handed 310
Helix 192	AV3	B	1443	1448	Right-handed alpha
Helix 193	AV4	B	1450	1462	Right-handed alpha
Helix 194	AV5	B	1488	1492	Right-handed alpha
Helix 195	AV6	B	1514	1519	Right-handed alpha
Helix 196	AV7	B	1519	1525	Right-handed alpha
Helix 197	AV8	B	1567	1570	Right-handed 310
Helix 198	AV9	B	1590	1592	Right-handed 310
Helix 199	AW1	B	1595	1611	Right-handed alpha
Helix 200	AW2	B	1628	1632	Right-handed 310
Helix 201	AW3	B	1634	1641	Right-handed alpha
Helix 202	AW4	B	1646	1652	Right-handed alpha
Helix 203	AW5	B	1662	1672	Right-handed alpha
Helix 204	AW6	B	1674	1678	Right-handed 310
Helix 205	AW7	B	1692	1697	Right-handed 310
Helix 206	AW8	B	1706	1712	Right-handed alpha
Helix 207	AW9	B	1795	1812	Right-handed alpha
Helix 208	AX1	B	1830	1842	Right-handed alpha
Helix 209	AX2	B	1845	1864	Right-handed alpha
Helix 210	AX3	B	1883	1898	Right-handed alpha
Helix 211	AX4	B	1901	1914	Right-handed alpha
Helix 212	AX5	B	1917	1929	Right-handed alpha
Helix 213	AX6	B	1930	1933	Right-handed 310
Helix 214	AX7	B	1934	1939	Right-handed alpha
Helix 215	AX8	B	1944	1964	Right-handed alpha
Helix 216	AX9	B	1967	1975	Right-handed alpha
Helix 217	AY1	B	1975	1980	Right-handed alpha
Helix 218	AY2	B	1985	1999	Right-handed alpha
Helix 219	AY3	B	2004	2021	Right-handed alpha
Helix 220	AY4	B	2022	2039	Right-handed alpha
Helix 221	AY5	B	2040	2042	Right-handed 310
Helix 222	AY6	B	2053	2067	Right-handed alpha
Helix 223	AY7	B	2078	2089	Right-handed alpha
Helix 224	AY8	B	2094	2114	Right-handed alpha
Helix 225	AY9	B	2121	2136	Right-handed alpha
Helix 226	AZ1	B	2137	2144	Right-handed alpha
Helix 227	AZ2	B	2151	2157	Right-handed alpha
Helix 228	AZ3	B	2177	2199	Right-handed alpha
Helix 229	AZ4	B	2203	2217	Right-handed alpha
Helix 230	AZ5	B	2223	2235	Right-handed alpha
Helix 231	AZ6	B	2239	2260	Right-handed alpha
Helix 232	AZ7	B	2263	2281	Right-handed alpha
Helix 233	AZ8	B	2289	2303	Right-handed alpha
Helix 234	AZ9	B	2306	2327	Right-handed alpha
Helix 235	BA1	B	2334	2343	Right-handed alpha
Helix 236	BA2	B	2346	2358	Right-handed alpha
Helix 237	BA3	B	2364	2374	Right-handed alpha
Helix 238	BA4	B	2375	2379	Right-handed 310
Helix 239	BA5	B	2381	2403	Right-handed alpha
Helix 240	BA6	B	2414	2423	Right-handed alpha
Helix 241	BA7	B	2591	2609	Right-handed alpha
Helix 242	BA8	B	2611	2629	Right-handed alpha
Helix 243	BA9	B	2632	2639	Right-handed 310
Helix 244	BB1	B	2640	2651	Right-handed alpha
Helix 245	BB2	B	2653	2670	Right-handed alpha
Helix 246	BB3	B	2673	2677	Right-handed 310
Helix 247	BB4	B	2680	2684	Right-handed 310
Helix 248	BB5	B	2706	2722	Right-handed alpha

There are 7 sheets in PDB entry 7R04. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	945	947	first strand
Strand 2	A	950	951	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1573	1577	first strand
Strand 2	A	1583	1588	anti-parallel
Strand 3	A	1618	1623	parallel
Strand 4	A	1653	1659	parallel
Strand 5	A	1685	1688	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1759	1763	first strand
Strand 2	A	1740	1745	anti-parallel
Strand 3	A	1730	1737	anti-parallel
Strand 4	A	1717	1725	anti-parallel
Strand 5	A	1789	1792	anti-parallel
Strand 6	A	1777	1782	anti-parallel
Strand 7	A	1767	1770	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1749	1751	first strand
Strand 2	A	1754	1756	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1572	1577	first strand
Strand 2	B	1583	1588	anti-parallel
Strand 3	B	1618	1623	parallel
Strand 4	B	1653	1659	parallel
Strand 5	B	1685	1688	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1759	1763	first strand
Strand 2	B	1740	1745	anti-parallel
Strand 3	B	1730	1737	anti-parallel
Strand 4	B	1717	1725	anti-parallel
Strand 5	B	1785	1792	anti-parallel
Strand 6	B	1777	1782	anti-parallel
Strand 7	B	1767	1774	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1749	1751	first strand
Strand 2	B	1754	1756	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R04

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R04