Analysis of interatomic Contacts of Structural Units in PDB entry:
7R0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R0I entry

There is 1 chain in PDB entry 7R0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 83GLY 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7R0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 117Right-handed alpha
Helix 2
AA2
A
124 153Right-handed alpha
Helix 3
AA3
A
157 179Right-handed alpha
Helix 4
AA4
A
192 222Right-handed alpha
Helix 5
AA5
A
241 243Right-handed 310
Helix 6
AA6
A
308 311Right-handed 310
Helix 7
AA7
A
312 326Right-handed alpha
Helix 8
AA8
A
329 360Right-handed alpha
Helix 9
AA9
A
364 380Right-handed alpha
Helix 10
AB1
A
383 402Right-handed alpha
Helix 11
AB2
A
408 418Right-handed alpha
Helix 12
AB3
A
445 457Right-handed alpha
Helix 13
AB4
A
462 475Right-handed alpha
Helix 14
AB5
A
502 508Right-handed alpha
Helix 15
AB6
A
514 527Right-handed alpha
Helix 16
AB7
A
553 564Right-handed alpha
Helix 17
AB8
A
575 587Right-handed alpha
Helix 18
AB9
A
598 608Right-handed alpha
Helix 19
AC1
A
622 629Right-handed alpha
Helix 20
AC2
A
637 644Right-handed 310
Helix 21
AC3
A
655 691Right-handed alpha
Helix 22
AC4
A
703 724Right-handed alpha
Helix 23
AC5
A
725 728Right-handed 310
Helix 24
AC6
A
730 734Right-handed 310
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There are 4 sheets in PDB entry 7R0I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 239first strand
Strand 2
A
226 231anti-parallel
Strand 3
A
248 251anti-parallel
Strand 4
A
301 307anti-parallel
Strand 5
A
260 266anti-parallel
Strand 6
A
289 290anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 284first strand
Strand 2
A
268 271anti-parallel
Strand 3
A
295 296anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 406first strand
Strand 2
A
648 650anti-parallel
Strand 3
A
631 634parallel
Strand 4
A
613 617parallel
Strand 5
A
420 424parallel
Strand 6
A
567 571parallel
Strand 7
A
590 592parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 441first strand
Strand 2
A
540 547anti-parallel
Strand 3
A
532 535anti-parallel
Strand 4
A
498 501anti-parallel
Strand 5
A
492 495anti-parallel
Strand 6
A
486 488anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il