Analysis of interatomic Contacts of Structural Units in PDB entry:
7R0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R0K entry

There are 2 chains in PDB entry 7R0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2LYS 726
B
 ARG 2GLY 596
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7R0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
78 92Right-handed alpha
Helix 3
AA3
A
98 111Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
122 130Right-handed alpha
Helix 6
AA6
A
136 145Right-handed alpha
Helix 7
AA7
A
185 196Right-handed alpha
Helix 8
AA8
A
203 221Right-handed alpha
Helix 9
AA9
A
233 237Right-handed 310
Helix 10
AB1
A
238 267Right-handed alpha
Helix 11
AB2
A
267 277Right-handed alpha
Helix 12
AB3
A
277 292Right-handed alpha
Helix 13
AB4
A
296 327Right-handed alpha
Helix 14
AB5
A
328 333Right-handed 310
Helix 15
AB6
A
339 348Right-handed alpha
Helix 16
AB7
A
367 375Right-handed alpha
Helix 17
AB8
A
384 408Right-handed alpha
Helix 18
AB9
A
442 446Right-handed 310
Helix 19
AC1
A
450 457Right-handed alpha
Helix 20
AC2
A
458 461Right-handed 310
Helix 21
AC3
A
464 467Right-handed 310
Helix 22
AC4
A
484 495Right-handed alpha
Helix 23
AC5
A
496 505Right-handed alpha
Helix 24
AC6
A
508 518Right-handed alpha
Helix 25
AC7
A
525 533Right-handed alpha
Helix 26
AC8
A
533 547Right-handed alpha
Helix 27
AC9
A
552 561Right-handed alpha
Helix 28
AD1
A
563 578Right-handed alpha
Helix 29
AD2
A
578 595Right-handed alpha
Helix 30
AD3
A
619 621Right-handed 310
Helix 31
AD4
A
622 630Right-handed alpha
Helix 32
AD5
A
630 671Right-handed alpha
Helix 33
AD6
A
693 706Right-handed alpha
Helix 34
AD7
B
11 22Right-handed alpha
Helix 35
AD8
B
78 92Right-handed alpha
Helix 36
AD9
B
98 111Right-handed alpha
Helix 37
AE1
B
113 118Right-handed alpha
Helix 38
AE2
B
122 130Right-handed alpha
Helix 39
AE3
B
136 145Right-handed alpha
Helix 40
AE4
B
187 196Right-handed alpha
Helix 41
AE5
B
203 220Right-handed alpha
Helix 42
AE6
B
233 237Right-handed 310
Helix 43
AE7
B
238 267Right-handed alpha
Helix 44
AE8
B
267 277Right-handed alpha
Helix 45
AE9
B
277 292Right-handed alpha
Helix 46
AF1
B
296 326Right-handed alpha
Helix 47
AF2
B
327 331Right-handed 310
Helix 48
AF3
B
339 348Right-handed alpha
Helix 49
AF4
B
367 375Right-handed alpha
Helix 50
AF5
B
381 383Right-handed 310
Helix 51
AF6
B
384 411Right-handed alpha
Helix 52
AF7
B
412 416Right-handed 310
Helix 53
AF8
B
442 446Right-handed 310
Helix 54
AF9
B
450 457Right-handed alpha
Helix 55
AG1
B
458 461Right-handed 310
Helix 56
AG2
B
464 467Right-handed 310
Helix 57
AG3
B
484 495Right-handed alpha
Helix 58
AG4
B
496 505Right-handed alpha
Helix 59
AG5
B
526 531Right-handed alpha
Helix 60
AG6
B
533 547Right-handed alpha
Helix 61
AG7
B
548 550Right-handed 310
Helix 62
AG8
B
552 561Right-handed alpha
Helix 63
AG9
B
563 578Right-handed alpha
Helix 64
AH1
B
578 595Right-handed alpha
Helix 65
AH2
B
622 630Right-handed alpha
Helix 66
AH3
B
630 671Right-handed alpha
Helix 67
AH4
B
691 706Right-handed alpha
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There are 12 sheets in PDB entry 7R0K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
57 62parallel
Strand 3
A
45 54anti-parallel
Strand 4
A
25 32anti-parallel
Strand 5
A
94 96parallel
Strand 6
A
120 121parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
293 295anti-parallel
Strand 3
A
469 470anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 427first strand
Strand 2
A
437 439anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
675 680first strand
Strand 2
A
684 690anti-parallel
Strand 3
A
475 482anti-parallel
Strand 4
A
716 721anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 599first strand
Strand 2
A
606 608anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 709first strand
Strand 2
A
712 713anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
57 62parallel
Strand 3
B
45 54anti-parallel
Strand 4
B
25 32anti-parallel
Strand 5
B
94 96parallel
Strand 6
B
120 121parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 422first strand
Strand 2
B
293 295anti-parallel
Strand 3
B
469 470anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
425 427first strand
Strand 2
B
437 439anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
675 681first strand
Strand 2
B
684 690anti-parallel
Strand 3
B
475 481anti-parallel
Strand 4
B
717 721anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
597 599first strand
Strand 2
B
606 608anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
708 709first strand
Strand 2
B
712 713anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il