Analysis of interatomic Contacts of Structural Units in PDB entry:
7R0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R0X entry

There is 1 chain in PDB entry 7R0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 31SER 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 7R0X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
63 65Right-handed 310
Helix 2
AA2
A
66 72Right-handed alpha
Helix 3
AA3
A
96 110Right-handed alpha
Helix 4
AA4
A
123 139Right-handed alpha
Helix 5
AA5
A
155 163Right-handed alpha
Helix 6
AA6
A
166 183Right-handed alpha
Helix 7
AA7
A
194 198Right-handed alpha
Helix 8
AA8
A
200 205Right-handed 310
Helix 9
AA9
A
211 223Right-handed alpha
Helix 10
AB1
A
228 252Right-handed alpha
Helix 11
AB2
A
260 264Right-handed 310
Helix 12
AB3
A
304 313Right-handed alpha
Helix 13
AB4
A
334 351Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7R0X.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
37 39first strand
Strand 2
A
80 82anti-parallel
Strand 3
A
53 56parallel
Strand 4
A
117 122parallel
Strand 5
A
143 149parallel
Strand 6
A
265 271parallel
Strand 7
A
319 323parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il