Analysis of interatomic Contacts of Structural Units in PDB entry:
7R10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R10 entry

There are 2 chains in PDB entry 7R10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	SER 19	TYR 613
A	GLN 14	THR 676

There are 39 helices in PDB entry 7R10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	20	53	Right-handed alpha
Helix 2	AA2	D	55	81	Right-handed alpha
Helix 3	AA3	D	92	101	Right-handed alpha
Helix 4	AA4	D	103	108	Right-handed 310
Helix 5	AA5	D	109	129	Right-handed alpha
Helix 6	AA6	D	147	155	Right-handed alpha
Helix 7	AA7	D	157	173	Right-handed alpha
Helix 8	AA8	D	176	194	Right-handed alpha
Helix 9	AA9	D	198	205	Right-handed alpha
Helix 10	AB1	D	218	224	Right-handed alpha
Helix 11	AB2	D	226	233	Right-handed alpha
Helix 12	AB3	D	233	249	Right-handed alpha
Helix 13	AB4	D	265	268	Right-handed 310
Helix 14	AB5	D	275	281	Right-handed 310
Helix 15	AB6	D	293	301	Right-handed alpha
Helix 16	AB7	D	305	319	Right-handed alpha
Helix 17	AB8	D	326	331	Right-handed alpha
Helix 18	AB9	D	365	385	Right-handed alpha
Helix 19	AC1	D	389	393	Right-handed 310
Helix 20	AC2	D	399	413	Right-handed alpha
Helix 21	AC3	D	414	421	Right-handed alpha
Helix 22	AC4	D	431	447	Right-handed alpha
Helix 23	AC5	D	449	466	Right-handed alpha
Helix 24	AC6	D	472	484	Right-handed alpha
Helix 25	AC7	D	499	502	Right-handed 310
Helix 26	AC8	D	503	508	Right-handed alpha
Helix 27	AC9	D	513	533	Right-handed alpha
Helix 28	AD1	D	538	542	Right-handed 310
Helix 29	AD2	D	547	559	Right-handed alpha
Helix 30	AD3	D	565	572	Right-handed alpha
Helix 31	AD4	D	581	588	Right-handed alpha
Helix 32	AD5	D	588	599	Right-handed alpha
Helix 33	AD6	A	294	304	Right-handed alpha
Helix 34	AD7	A	338	343	Right-handed alpha
Helix 35	AD8	A	364	370	Right-handed alpha
Helix 36	AD9	A	385	389	Right-handed 310
Helix 37	AE1	A	405	410	Right-handed 310
Helix 38	AE2	A	416	422	Right-handed alpha
Helix 39	AE3	A	502	505	Right-handed 310

There are 13 sheets in PDB entry 7R10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	356	359	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	263	269	anti-parallel
Strand 4	A	90	96	anti-parallel
Strand 5	A	186	197	anti-parallel
Strand 6	A	200	212	anti-parallel
Strand 7	A	222	230	anti-parallel
Strand 8	A	36	37	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	85	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	140	anti-parallel
Strand 6	A	158	171	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	143	first strand
Strand 2	A	244	245	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	313	first strand
Strand 2	A	595	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	643	645	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	555	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	575	577	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	524	525	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	664	667	first strand
Strand 2	A	670	672	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R10

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R10