Analysis of interatomic Contacts of Structural Units in PDB entry:
7R1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R1M entry

There are 3 chains in PDB entry 7R1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 22HIS 177
B
 THR 22HIS 173
C
 THR 22HIS 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 7R1M. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
120 124Right-handed alpha
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There are 9 sheets in PDB entry 7R1M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
157 169anti-parallel
Strand 3
A
76 88anti-parallel
Strand 4
A
126 131anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
157 169anti-parallel
Strand 4
A
76 88anti-parallel
Strand 5
A
135 139anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
70 72anti-parallel
Strand 3
A
144 153anti-parallel
Strand 4
A
97 104anti-parallel
Strand 5
A
116 119anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 37first strand
Strand 2
B
157 169anti-parallel
Strand 3
B
76 88anti-parallel
Strand 4
B
126 131anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
26 31anti-parallel
Strand 3
B
157 169anti-parallel
Strand 4
B
76 88anti-parallel
Strand 5
B
135 139anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 65first strand
Strand 2
B
70 72anti-parallel
Strand 3
B
144 153anti-parallel
Strand 4
B
97 104anti-parallel
Strand 5
B
116 119anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 37first strand
Strand 2
C
157 169anti-parallel
Strand 3
C
76 87anti-parallel
Strand 4
C
127 131anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 61first strand
Strand 2
C
26 31anti-parallel
Strand 3
C
157 169anti-parallel
Strand 4
C
76 87anti-parallel
Strand 5
C
135 139anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 65first strand
Strand 2
C
70 72anti-parallel
Strand 3
C
144 153anti-parallel
Strand 4
C
96 104anti-parallel
Strand 5
C
116 120anti-parallel
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