Analysis of interatomic Contacts of Structural Units in PDB entry:
7R1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R1Z entry

There are 3 chains in PDB entry 7R1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 GLU 3SER 127
A
 GLN 212GLN 330
C
 GLU 3SER 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7R1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
30 34Right-handed 310
Helix 2
AA2
E
64 67Right-handed 310
Helix 3
AA3
E
76 78Right-handed 310
Helix 4
AA4
E
89 93Right-handed 310
Helix 5
AA5
E
111 115Right-handed 310
Helix 6
AA6
A
216 232Right-handed alpha
Helix 7
AA7
A
234 247Right-handed 310
Helix 8
AA8
A
248 258Right-handed alpha
Helix 9
AA9
A
259 261Right-handed 310
Helix 10
AB1
A
263 277Right-handed alpha
Helix 11
AB2
A
280 290Right-handed alpha
Helix 12
AB3
A
297 313Right-handed alpha
Helix 13
AB4
A
317 328Right-handed alpha
Helix 14
AB5
C
89 93Right-handed 310
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There are 6 sheets in PDB entry 7R1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 9first strand
Strand 2
E
20 26anti-parallel
Strand 3
E
80 85anti-parallel
Strand 4
E
70 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 14first strand
Strand 2
E
122 126parallel
Strand 3
E
94 101anti-parallel
Strand 4
E
35 41anti-parallel
Strand 5
E
48 53anti-parallel
Strand 6
E
60 62anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
12 14first strand
Strand 2
E
122 126parallel
Strand 3
E
94 101anti-parallel
Strand 4
E
117 118anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 9first strand
Strand 2
C
20 27anti-parallel
Strand 3
C
80 85anti-parallel
Strand 4
C
70 74anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 15first strand
Strand 2
C
114 119parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
35 41anti-parallel
Strand 5
C
48 54anti-parallel
Strand 6
C
60 62anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 15first strand
Strand 2
C
114 119parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
109 110anti-parallel
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