Analysis of interatomic Contacts of Structural Units in PDB entry:
7R2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R2M entry

There are 4 chains in PDB entry 7R2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASP 6ASP 422
A
 ASP 6ASP 422
B
 GLN 201VAL 206
E
 GLN 201VAL 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7R2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
51 57Right-handed alpha
Helix 2
AA2
D
77 87Right-handed alpha
Helix 3
AA3
D
117 131Right-handed alpha
Helix 4
AA4
D
135 144Right-handed alpha
Helix 5
AA5
D
147 163Right-handed alpha
Helix 6
AA6
D
165 174Right-handed alpha
Helix 7
AA7
D
175 187Right-handed alpha
Helix 8
AA8
D
188 202Right-handed alpha
Helix 9
AA9
D
207 218Right-handed alpha
Helix 10
AB1
D
219 235Right-handed alpha
Helix 11
AB2
D
237 246Right-handed alpha
Helix 12
AB3
D
247 259Right-handed alpha
Helix 13
AB4
D
270 285Right-handed alpha
Helix 14
AB5
D
292 303Right-handed alpha
Helix 15
AB6
D
304 319Right-handed alpha
Helix 16
AB7
D
322 331Right-handed alpha
Helix 17
AB8
D
332 362Right-handed alpha
Helix 18
AB9
D
367 379Right-handed alpha
Helix 19
AC1
D
382 395Right-handed alpha
Helix 20
AC2
D
397 406Right-handed alpha
Helix 21
AC3
D
407 419Right-handed alpha
Helix 22
AC4
A
51 57Right-handed alpha
Helix 23
AC5
A
77 87Right-handed alpha
Helix 24
AC6
A
117 131Right-handed alpha
Helix 25
AC7
A
135 144Right-handed alpha
Helix 26
AC8
A
147 163Right-handed alpha
Helix 27
AC9
A
165 174Right-handed alpha
Helix 28
AD1
A
175 187Right-handed alpha
Helix 29
AD2
A
188 201Right-handed alpha
Helix 30
AD3
A
207 218Right-handed alpha
Helix 31
AD4
A
219 235Right-handed alpha
Helix 32
AD5
A
237 246Right-handed alpha
Helix 33
AD6
A
247 259Right-handed alpha
Helix 34
AD7
A
270 284Right-handed alpha
Helix 35
AD8
A
292 303Right-handed alpha
Helix 36
AD9
A
304 319Right-handed alpha
Helix 37
AE1
A
322 331Right-handed alpha
Helix 38
AE2
A
332 363Right-handed alpha
Helix 39
AE3
A
367 378Right-handed alpha
Helix 40
AE4
A
382 395Right-handed alpha
Helix 41
AE5
A
397 406Right-handed alpha
Helix 42
AE6
A
407 419Right-handed alpha
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There are 4 sheets in PDB entry 7R2M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 17first strand
Strand 2
D
91 100anti-parallel
Strand 3
D
64 68anti-parallel
Strand 4
D
71 72anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 17first strand
Strand 2
D
91 100anti-parallel
Strand 3
D
64 68anti-parallel
Strand 4
D
42 47anti-parallel
Strand 5
D
25 29anti-parallel
Strand 6
E
204 206anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 17first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
71 72anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 17first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
42 47anti-parallel
Strand 5
A
25 29anti-parallel
Strand 6
B
204 206anti-parallel
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