Analysis of interatomic Contacts of Structural Units in PDB entry:
7R2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R2T entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 7R2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 7ASP 422
B
 SER 202THR 204
B
 VAL 206VAL 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7R2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 57Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
117 130Right-handed alpha
Helix 4
AA4
A
135 144Right-handed alpha
Helix 5
AA5
A
147 163Right-handed alpha
Helix 6
AA6
A
165 174Right-handed alpha
Helix 7
AA7
A
175 187Right-handed alpha
Helix 8
AA8
A
188 202Right-handed alpha
Helix 9
AA9
A
207 218Right-handed alpha
Helix 10
AB1
A
219 235Right-handed alpha
Helix 11
AB2
A
237 246Right-handed alpha
Helix 12
AB3
A
247 259Right-handed alpha
Helix 13
AB4
A
270 285Right-handed alpha
Helix 14
AB5
A
292 303Right-handed alpha
Helix 15
AB6
A
304 319Right-handed alpha
Helix 16
AB7
A
322 329Right-handed alpha
Helix 17
AB8
A
332 363Right-handed alpha
Helix 18
AB9
A
367 379Right-handed alpha
Helix 19
AC1
A
382 395Right-handed alpha
Helix 20
AC2
A
397 406Right-handed alpha
Helix 21
AC3
A
407 419Right-handed alpha
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There are 2 sheets in PDB entry 7R2T. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 17first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
71 72anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 17first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
42 47anti-parallel
Strand 5
A
25 29anti-parallel
Strand 6
B
204 206anti-parallel
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