Analysis of interatomic Contacts of Structural Units in PDB entry:
7R2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R2W entry

There is 1 chain in PDB entry 7R2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3HIS 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 7R2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 35Right-handed alpha
Helix 2
AA2
A
64 77Right-handed alpha
Helix 3
AA3
A
81 84Right-handed 310
Helix 4
AA4
A
111 115Right-handed 310
Helix 5
AA5
A
136 155Right-handed alpha
Helix 6
AA6
A
195 207Right-handed alpha
Helix 7
AA7
A
213 217Right-handed 310
Helix 8
AA8
A
234 238Right-handed 310
Helix 9
AA9
A
270 289Right-handed alpha
Helix 10
AB1
A
322 334Right-handed alpha
Helix 11
AB2
A
337 346Right-handed alpha
Helix 12
AB3
A
352 357Right-handed 310
Helix 13
AB4
A
366 370Right-handed 310
Helix 14
AB5
A
373 381Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7R2W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
161 174anti-parallel
Strand 3
A
177 190anti-parallel
Strand 4
A
222 225parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 97first strand
Strand 2
A
50 58parallel
Strand 3
A
39 47anti-parallel
Strand 4
A
241 242anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
85 86anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 128first strand
Strand 2
A
294 301anti-parallel
Strand 3
A
310 314anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il