Analysis of interatomic Contacts of Structural Units in PDB entry:
7R36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R36 entry

There are 2 chains in PDB entry 7R36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 77GLY 643
B
 SER 77GLY 643
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7R36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
92 103Right-handed alpha
Helix 2
AA2
A
121 126Right-handed alpha
Helix 3
AA3
A
127 133Right-handed 310
Helix 4
AA4
A
147 151Right-handed 310
Helix 5
AA5
A
164 169Right-handed 310
Helix 6
AA6
A
178 184Right-handed alpha
Helix 7
AA7
A
191 202Right-handed alpha
Helix 8
AA8
A
231 243Right-handed alpha
Helix 9
AA9
A
275 280Right-handed alpha
Helix 10
AB1
A
281 285Right-handed 310
Helix 11
AB2
A
341 353Right-handed alpha
Helix 12
AB3
A
357 364Right-handed alpha
Helix 13
AB4
A
392 396Right-handed 310
Helix 14
AB5
A
399 405Right-handed alpha
Helix 15
AB6
A
412 423Right-handed alpha
Helix 16
AB7
A
425 429Right-handed 310
Helix 17
AB8
A
461 472Right-handed alpha
Helix 18
AB9
A
521 540Right-handed alpha
Helix 19
AC1
A
540 545Right-handed alpha
Helix 20
AC2
A
559 569Right-handed alpha
Helix 21
AC3
A
609 613Right-handed 310
Helix 22
AC4
A
621 637Right-handed alpha
Helix 23
AC5
B
92 103Right-handed alpha
Helix 24
AC6
B
121 126Right-handed alpha
Helix 25
AC7
B
127 133Right-handed 310
Helix 26
AC8
B
178 184Right-handed alpha
Helix 27
AC9
B
195 202Right-handed alpha
Helix 28
AD1
B
229 243Right-handed alpha
Helix 29
AD2
B
275 281Right-handed alpha
Helix 30
AD3
B
282 285Right-handed 310
Helix 31
AD4
B
341 352Right-handed alpha
Helix 32
AD5
B
357 364Right-handed alpha
Helix 33
AD6
B
392 396Right-handed 310
Helix 34
AD7
B
399 405Right-handed alpha
Helix 35
AD8
B
412 423Right-handed alpha
Helix 36
AD9
B
461 472Right-handed alpha
Helix 37
AE1
B
521 540Right-handed alpha
Helix 38
AE2
B
540 545Right-handed alpha
Helix 39
AE3
B
559 571Right-handed alpha
Helix 40
AE4
B
609 613Right-handed 310
Helix 41
AE5
B
621 637Right-handed alpha
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There are 16 sheets in PDB entry 7R36. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
110 113parallel
Strand 3
A
83 89parallel
Strand 4
A
327 339parallel
Strand 5
A
311 318anti-parallel
Strand 6
A
297 304anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
110 113parallel
Strand 3
A
83 89parallel
Strand 4
A
327 339parallel
Strand 5
A
605 607parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
156 157anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
265 266anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
220 222parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 263first strand
Strand 2
A
434 438anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
482 489anti-parallel
Strand 5
A
383 390anti-parallel
Strand 6
A
572 573anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 269first strand
Strand 2
A
272 273anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 356first strand
Strand 2
A
370 371parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
497 499first strand
Strand 2
A
510 512anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 294first strand
Strand 2
B
110 114parallel
Strand 3
B
83 89parallel
Strand 4
B
326 339parallel
Strand 5
B
312 318anti-parallel
Strand 6
B
297 303anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 294first strand
Strand 2
B
110 114parallel
Strand 3
B
83 89parallel
Strand 4
B
326 339parallel
Strand 5
B
605 607parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
156 157anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 205first strand
Strand 2
B
220 222parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 263first strand
Strand 2
B
434 438anti-parallel
Strand 3
B
448 453anti-parallel
Strand 4
B
482 489anti-parallel
Strand 5
B
383 390anti-parallel
Strand 6
B
572 573anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 269first strand
Strand 2
B
272 273anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
497 500first strand
Strand 2
B
509 512anti-parallel
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