Analysis of interatomic Contacts of Structural Units in PDB entry:
7R4J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R4J entry

There is 1 chain in PDB entry 7R4J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 64GLN 442
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7R4J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 87Right-handed alpha
Helix 2
AA2
A
110 131Right-handed alpha
Helix 3
AA3
A
142 144Right-handed 310
Helix 4
AA4
A
145 152Right-handed alpha
Helix 5
AA5
A
160 170Right-handed alpha
Helix 6
AA6
A
195 201Right-handed alpha
Helix 7
AA7
A
201 212Right-handed alpha
Helix 8
AA8
A
313 317Right-handed 310
Helix 9
AA9
A
318 325Right-handed alpha
Helix 10
AB1
A
331 338Right-handed alpha
Helix 11
AB2
A
349 361Right-handed alpha
Helix 12
AB3
A
431 434Right-handed 310
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There are 5 sheets in PDB entry 7R4J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 140first strand
Strand 2
A
70 75parallel
Strand 3
A
154 159parallel
Strand 4
A
178 182parallel
Strand 5
A
193 194parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 219first strand
Strand 2
A
435 439anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 274first strand
Strand 2
A
222 228anti-parallel
Strand 3
A
423 429anti-parallel
Strand 4
A
397 402anti-parallel
Strand 5
A
289 295anti-parallel
Strand 6
A
301 305anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
415 418anti-parallel
Strand 3
A
407 411anti-parallel
Strand 4
A
278 282anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 311first strand
Strand 2
A
373 377anti-parallel
Strand 3
A
392 395anti-parallel
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