Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R6B entry

There are 2 chains in PDB entry 7R6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3THR 337
B
 LYS 3ASP 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7R6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
29 37Right-handed alpha
Helix 3
AA3
A
38 43Right-handed 310
Helix 4
AA4
A
59 63Right-handed 310
Helix 5
AA5
A
64 79Right-handed alpha
Helix 6
AA6
A
80 82Right-handed 310
Helix 7
AA7
A
93 104Right-handed alpha
Helix 8
AA8
A
127 142Right-handed alpha
Helix 9
AA9
A
159 161Right-handed 310
Helix 10
AB1
A
222 230Right-handed alpha
Helix 11
AB2
A
250 263Right-handed alpha
Helix 12
AB3
A
288 292Right-handed alpha
Helix 13
AB4
A
301 314Right-handed alpha
Helix 14
AB5
A
318 328Right-handed alpha
Helix 15
AB6
B
13 15Right-handed 310
Helix 16
AB7
B
29 37Right-handed alpha
Helix 17
AB8
B
38 43Right-handed 310
Helix 18
AB9
B
59 63Right-handed 310
Helix 19
AC1
B
64 78Right-handed alpha
Helix 20
AC2
B
79 82Right-handed 310
Helix 21
AC3
B
93 104Right-handed alpha
Helix 22
AC4
B
127 142Right-handed alpha
Helix 23
AC5
B
159 161Right-handed 310
Helix 24
AC6
B
222 230Right-handed alpha
Helix 25
AC7
B
250 263Right-handed alpha
Helix 26
AC8
B
288 292Right-handed alpha
Helix 27
AC9
B
301 314Right-handed alpha
Helix 28
AD1
B
318 328Right-handed alpha
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There are 9 sheets in PDB entry 7R6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
5 10parallel
Strand 3
A
84 88parallel
Strand 4
A
112 115parallel
Strand 5
A
147 151parallel
Strand 6
A
154 157anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
23 25anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
203 204anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
172 173anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 216first strand
Strand 2
A
236 241parallel
Strand 3
A
266 271parallel
Strand 4
A
295 296parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 53first strand
Strand 2
B
5 10parallel
Strand 3
B
84 88parallel
Strand 4
B
112 115parallel
Strand 5
B
147 151parallel
Strand 6
B
154 157anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
25 26anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 106first strand
Strand 2
B
203 204anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 216first strand
Strand 2
B
236 242parallel
Strand 3
B
266 272parallel
Strand 4
B
295 296parallel
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