Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R6Q entry

There are 19 chains in PDB entry 7R6Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
6	C 1	A 232
D	GLU 42	ILE 489
G	LEU 46	ARG 249
K	ALA 31	ILE 345
n	MET 1	GLN 594
o	GLU 88	TRP 220
t	LEU 12	ASN 322
X	ALA 2	ARG 125
m	SER 236	GLU 415
1	G 1	A 1835
v	ARG 175	GLY 227
2	U 102	U 158
N	GLY 2	PRO 154
h	GLY 72	ALA 110
Z	LEU 51	THR 66
g	PHE 7	SER 79
w	MET 449	ASN 710
i	ILE 26	HIS 100
L	PHE 75	LYS 117

There are117 helices in PDB entry 7R6Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	43	47	Right-handed 310
Helix 2	AA2	D	50	61	Right-handed alpha
Helix 3	AA3	D	66	71	Right-handed alpha
Helix 4	AA4	D	72	78	Right-handed alpha
Helix 5	AA5	D	91	108	Right-handed alpha
Helix 6	AA6	D	110	114	Right-handed 310
Helix 7	AA7	D	123	138	Right-handed alpha
Helix 8	AA8	D	153	164	Right-handed alpha
Helix 9	AA9	D	171	182	Right-handed alpha
Helix 10	AB1	D	197	205	Right-handed alpha
Helix 11	AB2	D	206	217	Right-handed alpha
Helix 12	AB3	D	232	241	Right-handed alpha
Helix 13	AB4	D	275	287	Right-handed alpha
Helix 14	AB5	D	298	312	Right-handed alpha
Helix 15	AB6	D	324	336	Right-handed alpha
Helix 16	AB7	D	369	384	Right-handed alpha
Helix 17	AB8	D	400	408	Right-handed alpha
Helix 18	AB9	D	418	422	Right-handed 310
Helix 19	AC1	D	425	436	Right-handed alpha
Helix 20	AC2	D	436	456	Right-handed alpha
Helix 21	AC3	D	464	468	Right-handed 310
Helix 22	AC4	D	469	476	Right-handed alpha
Helix 23	AC5	G	47	52	Right-handed 310
Helix 24	AC6	G	53	69	Right-handed alpha
Helix 25	AC7	G	72	77	Right-handed alpha
Helix 26	AC8	G	78	80	Right-handed 310
Helix 27	AC9	G	83	95	Right-handed alpha
Helix 28	AD1	G	96	98	Right-handed 310
Helix 29	AD2	G	101	119	Right-handed alpha
Helix 30	AD3	G	135	145	Right-handed alpha
Helix 31	AD4	G	159	163	Right-handed 310
Helix 32	AD5	G	164	173	Right-handed alpha
Helix 33	AD6	G	182	189	Right-handed alpha
Helix 34	AD7	G	204	206	Right-handed 310
Helix 35	AD8	G	207	222	Right-handed alpha
Helix 36	AD9	G	222	227	Right-handed alpha
Helix 37	AE1	G	239	247	Right-handed alpha
Helix 38	AE2	K	33	49	Right-handed alpha
Helix 39	AE3	K	69	74	Right-handed alpha
Helix 40	AE4	K	106	114	Right-handed alpha
Helix 41	AE5	K	136	145	Right-handed alpha
Helix 42	AE6	K	146	148	Right-handed 310
Helix 43	AE7	K	166	175	Right-handed alpha
Helix 44	AE8	K	186	188	Right-handed 310
Helix 45	AE9	K	189	195	Right-handed alpha
Helix 46	AF1	K	197	201	Right-handed 310
Helix 47	AF2	K	218	232	Right-handed alpha
Helix 48	AF3	K	255	274	Right-handed alpha
Helix 49	AF4	K	295	301	Right-handed 310
Helix 50	AF5	K	327	335	Right-handed alpha
Helix 51	AF6	n	17	26	Right-handed alpha
Helix 52	AF7	n	28	40	Right-handed alpha
Helix 53	AF8	n	48	53	Right-handed alpha
Helix 54	AF9	n	64	73	Right-handed alpha
Helix 55	AG1	n	74	96	Right-handed alpha
Helix 56	AG2	n	98	108	Right-handed alpha
Helix 57	AG3	n	114	122	Right-handed alpha
Helix 58	AG4	n	124	144	Right-handed alpha
Helix 59	AG5	n	152	174	Right-handed alpha
Helix 60	AG6	n	214	240	Right-handed alpha
Helix 61	AG7	n	249	254	Right-handed alpha
Helix 62	AG8	n	258	260	Right-handed 310
Helix 63	AG9	n	354	359	Right-handed 310
Helix 64	AH1	n	373	382	Right-handed alpha
Helix 65	AH2	n	389	393	Right-handed 310
Helix 66	AH3	n	429	439	Right-handed alpha
Helix 67	AH4	n	554	559	Right-handed 310
Helix 68	AH5	n	560	594	Right-handed alpha
Helix 69	AH6	o	103	112	Right-handed alpha
Helix 70	AH7	o	113	115	Right-handed 310
Helix 71	AH8	o	141	153	Right-handed alpha
Helix 72	AH9	o	192	211	Right-handed alpha
Helix 73	AI1	o	212	215	Right-handed 310
Helix 74	AI2	t	25	51	Right-handed alpha
Helix 75	AI3	t	52	54	Right-handed 310
Helix 76	AI4	t	57	87	Right-handed alpha
Helix 77	AI5	t	156	166	Right-handed alpha
Helix 78	AI6	t	182	188	Right-handed alpha
Helix 79	AI7	t	190	192	Right-handed 310
Helix 80	AI8	t	200	211	Right-handed alpha
Helix 81	AI9	t	231	240	Right-handed alpha
Helix 82	AJ1	t	241	243	Right-handed 310
Helix 83	AJ2	t	246	256	Right-handed alpha
Helix 84	AJ3	t	260	269	Right-handed alpha
Helix 85	AJ4	t	281	299	Right-handed alpha
Helix 86	AJ5	t	313	321	Right-handed alpha
Helix 87	AJ6	X	5	16	Right-handed alpha
Helix 88	AJ7	m	262	266	Right-handed 310
Helix 89	AJ8	m	270	285	Right-handed alpha
Helix 90	AJ9	m	290	298	Right-handed alpha
Helix 91	AK1	m	333	337	Right-handed 310
Helix 92	AK2	m	341	345	Right-handed 310
Helix 93	AK3	m	347	357	Right-handed alpha
Helix 94	AK4	m	383	397	Right-handed alpha
Helix 95	AK5	m	408	413	Right-handed 310
Helix 96	AK6	v	178	193	Right-handed alpha
Helix 97	AK7	v	195	201	Right-handed alpha
Helix 98	AK8	v	211	227	Right-handed alpha
Helix 99	AK9	N	3	12	Right-handed alpha
Helix 100	AL1	N	16	32	Right-handed alpha
Helix 101	AL2	N	44	52	Right-handed alpha
Helix 102	AL3	N	97	110	Right-handed alpha
Helix 103	AL4	N	139	144	Right-handed alpha
Helix 104	AL5	h	101	110	Right-handed alpha
Helix 105	AL6	Z	59	66	Right-handed alpha
Helix 106	AL7	g	58	65	Right-handed 310
Helix 107	AL8	g	66	70	Right-handed 310
Helix 108	AL9	w	456	479	Right-handed alpha
Helix 109	AM1	w	680	684	Right-handed 310
Helix 110	AM2	w	696	704	Right-handed alpha
Helix 111	AM3	w	705	707	Right-handed 310
Helix 112	AM4	i	27	31	Right-handed 310
Helix 113	AM5	i	34	49	Right-handed alpha
Helix 114	AM6	i	51	63	Right-handed alpha
Helix 115	AM7	i	82	99	Right-handed alpha
Helix 116	AM8	L	76	83	Right-handed alpha
Helix 117	AM9	L	105	117	Right-handed alpha

There are 19 sheets in PDB entry 7R6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	148	first strand
Strand 2	D	167	170	parallel
Strand 3	D	117	120	parallel
Strand 4	D	192	195	parallel
Strand 5	D	223	227	parallel
Strand 6	D	82	84	parallel
Strand 7	D	248	249	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	316	319	first strand
Strand 2	D	341	346	parallel
Strand 3	D	291	296	parallel
Strand 4	D	360	363	parallel
Strand 5	D	389	394	parallel
Strand 6	D	266	270	parallel
Strand 7	D	412	415	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	134	first strand
Strand 2	G	197	200	anti-parallel
Strand 3	G	150	154	anti-parallel
Strand 4	G	177	180	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	243	250	first strand
Strand 2	K	77	84	anti-parallel
Strand 3	K	276	283	anti-parallel
Strand 4	K	289	293	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	97	101	first strand
Strand 2	K	233	237	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	153	156	first strand
Strand 2	K	123	127	parallel
Strand 3	K	179	183	parallel
Strand 4	K	207	209	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	212	213	first strand
Strand 2	K	216	217	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	176	181	first strand
Strand 2	n	186	192	anti-parallel
Strand 3	n	195	201	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	247	248	first strand
Strand 2	n	262	263	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	n	386	387	first strand
Strand 2	n	364	367	parallel
Strand 3	n	409	411	parallel
Strand 4	n	425	427	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	117	124	first strand
Strand 2	o	131	139	anti-parallel
Strand 3	o	92	96	anti-parallel
Strand 4	o	163	166	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	156	157	first strand
Strand 2	o	160	161	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	14	20	first strand
Strand 2	m	399	405	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	129	134	first strand
Strand 2	t	99	104	anti-parallel
Strand 3	t	309	311	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	194	195	first strand
Strand 2	t	140	146	anti-parallel
Strand 3	t	173	179	anti-parallel
Strand 4	t	271	272	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	213	215	first strand
Strand 2	t	226	228	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	23	24	first strand
Strand 2	w	450	451	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	111	114	first strand
Strand 2	X	120	123	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	36	38	first strand
Strand 2	N	59	67	anti-parallel
Strand 3	N	127	135	anti-parallel
Strand 4	N	114	123	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R6Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6Q