Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R6T entry

There are 9 chains in PDB entry 7R6T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	LEU 62	GLU 348
F	C 1	C 9
A	G 2	G 10
C	VAL 61	LYS 350
E	C 1	G 8
B	C 3	A 11
L	VAL 61	GLU 348
M	C 1	T 7
K	A 4	G 10

There are 35 helices in PDB entry 7R6T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	127	131	Right-handed 310
Helix 2	AA2	D	143	148	Right-handed 310
Helix 3	AA3	D	150	157	Right-handed alpha
Helix 4	AA4	D	158	161	Right-handed 310
Helix 5	AA5	D	167	173	Right-handed alpha
Helix 6	AA6	D	173	185	Right-handed alpha
Helix 7	AA7	D	186	188	Right-handed 310
Helix 8	AA8	D	261	264	Right-handed 310
Helix 9	AA9	D	268	277	Right-handed alpha
Helix 10	AB1	D	293	297	Right-handed alpha
Helix 11	AB2	D	303	315	Right-handed alpha
Helix 12	AB3	D	321	332	Right-handed alpha
Helix 13	AB4	C	108	112	Right-handed 310
Helix 14	AB5	C	127	132	Right-handed alpha
Helix 15	AB6	C	143	148	Right-handed 310
Helix 16	AB7	C	150	158	Right-handed alpha
Helix 17	AB8	C	159	161	Right-handed 310
Helix 18	AB9	C	167	173	Right-handed alpha
Helix 19	AC1	C	173	189	Right-handed alpha
Helix 20	AC2	C	261	264	Right-handed 310
Helix 21	AC3	C	268	277	Right-handed alpha
Helix 22	AC4	C	293	297	Right-handed alpha
Helix 23	AC5	C	303	320	Right-handed alpha
Helix 24	AC6	C	323	335	Right-handed alpha
Helix 25	AC7	C	341	350	Right-handed alpha
Helix 26	AC8	L	143	147	Right-handed 310
Helix 27	AC9	L	150	158	Right-handed alpha
Helix 28	AD1	L	173	185	Right-handed alpha
Helix 29	AD2	L	186	188	Right-handed 310
Helix 30	AD3	L	206	208	Right-handed 310
Helix 31	AD4	L	261	264	Right-handed 310
Helix 32	AD5	L	268	277	Right-handed alpha
Helix 33	AD6	L	293	297	Right-handed alpha
Helix 34	AD7	L	303	319	Right-handed alpha
Helix 35	AD8	L	337	346	Right-handed alpha

There are 13 sheets in PDB entry 7R6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	80	85	anti-parallel
Strand 3	D	90	98	anti-parallel
Strand 4	D	191	199	anti-parallel
Strand 5	D	227	235	anti-parallel
Strand 6	D	245	252	anti-parallel
Strand 7	D	266	267	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	80	85	anti-parallel
Strand 3	D	90	98	anti-parallel
Strand 4	D	191	199	anti-parallel
Strand 5	D	227	235	anti-parallel
Strand 6	D	245	252	anti-parallel
Strand 7	D	291	292	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	140	first strand
Strand 2	D	163	166	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	204	first strand
Strand 2	D	210	217	anti-parallel
Strand 3	C	210	217	anti-parallel
Strand 4	C	202	204	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	222	224	first strand
Strand 2	D	210	217	anti-parallel
Strand 3	C	210	217	anti-parallel
Strand 4	C	222	224	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	80	85	anti-parallel
Strand 3	C	90	98	anti-parallel
Strand 4	C	191	199	anti-parallel
Strand 5	C	227	235	anti-parallel
Strand 6	C	245	252	anti-parallel
Strand 7	C	266	267	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	80	85	anti-parallel
Strand 3	C	90	98	anti-parallel
Strand 4	C	191	199	anti-parallel
Strand 5	C	227	235	anti-parallel
Strand 6	C	245	252	anti-parallel
Strand 7	C	291	292	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	140	first strand
Strand 2	C	163	166	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	74	76	first strand
Strand 2	L	80	85	anti-parallel
Strand 3	L	90	98	anti-parallel
Strand 4	L	191	199	anti-parallel
Strand 5	L	227	235	anti-parallel
Strand 6	L	244	252	anti-parallel
Strand 7	L	266	267	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	74	76	first strand
Strand 2	L	80	85	anti-parallel
Strand 3	L	90	98	anti-parallel
Strand 4	L	191	199	anti-parallel
Strand 5	L	227	235	anti-parallel
Strand 6	L	244	252	anti-parallel
Strand 7	L	290	292	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	137	140	first strand
Strand 2	L	163	166	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	203	205	first strand
Strand 2	L	209	211	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	215	217	first strand
Strand 2	L	222	224	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R6T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6T