Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R6V entry

There are 8 chains in PDB entry 7R6V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ALA 60	GLU 352
E	ALA 60	GLU 348
F	C 1	T 7
H	C 1	C 9
B	G 2	A 11
A	A 4	A 12
G	ALA 60	GLU 348
I	ALA 60	TYR 347

There are 62 helices in PDB entry 7R6V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	108	112	Right-handed 310
Helix 2	AA2	D	121	125	Right-handed 310
Helix 3	AA3	D	127	132	Right-handed alpha
Helix 4	AA4	D	143	148	Right-handed 310
Helix 5	AA5	D	150	157	Right-handed alpha
Helix 6	AA6	D	158	161	Right-handed 310
Helix 7	AA7	D	167	173	Right-handed alpha
Helix 8	AA8	D	173	185	Right-handed alpha
Helix 9	AA9	D	186	188	Right-handed 310
Helix 10	AB1	D	261	264	Right-handed 310
Helix 11	AB2	D	268	277	Right-handed alpha
Helix 12	AB3	D	293	297	Right-handed alpha
Helix 13	AB4	D	303	317	Right-handed alpha
Helix 14	AB5	D	321	333	Right-handed alpha
Helix 15	AB6	D	334	336	Right-handed 310
Helix 16	AB7	D	339	351	Right-handed alpha
Helix 17	AB8	E	108	112	Right-handed 310
Helix 18	AB9	E	121	125	Right-handed 310
Helix 19	AC1	E	127	132	Right-handed alpha
Helix 20	AC2	E	143	147	Right-handed 310
Helix 21	AC3	E	150	157	Right-handed alpha
Helix 22	AC4	E	158	161	Right-handed 310
Helix 23	AC5	E	167	173	Right-handed alpha
Helix 24	AC6	E	173	186	Right-handed alpha
Helix 25	AC7	E	261	264	Right-handed 310
Helix 26	AC8	E	268	277	Right-handed alpha
Helix 27	AC9	E	293	297	Right-handed alpha
Helix 28	AD1	E	303	315	Right-handed alpha
Helix 29	AD2	E	316	318	Right-handed 310
Helix 30	AD3	E	322	333	Right-handed alpha
Helix 31	AD4	E	341	348	Right-handed alpha
Helix 32	AD5	G	108	112	Right-handed 310
Helix 33	AD6	G	121	125	Right-handed 310
Helix 34	AD7	G	127	132	Right-handed alpha
Helix 35	AD8	G	143	147	Right-handed 310
Helix 36	AD9	G	150	157	Right-handed alpha
Helix 37	AE1	G	158	161	Right-handed 310
Helix 38	AE2	G	167	173	Right-handed alpha
Helix 39	AE3	G	173	186	Right-handed alpha
Helix 40	AE4	G	261	264	Right-handed 310
Helix 41	AE5	G	268	277	Right-handed alpha
Helix 42	AE6	G	293	297	Right-handed alpha
Helix 43	AE7	G	303	317	Right-handed alpha
Helix 44	AE8	G	322	334	Right-handed alpha
Helix 45	AE9	G	340	348	Right-handed alpha
Helix 46	AF1	I	60	64	Right-handed 310
Helix 47	AF2	I	108	112	Right-handed 310
Helix 48	AF3	I	121	125	Right-handed 310
Helix 49	AF4	I	127	132	Right-handed alpha
Helix 50	AF5	I	143	147	Right-handed 310
Helix 51	AF6	I	150	157	Right-handed alpha
Helix 52	AF7	I	158	161	Right-handed 310
Helix 53	AF8	I	167	173	Right-handed alpha
Helix 54	AF9	I	173	185	Right-handed alpha
Helix 55	AG1	I	186	188	Right-handed 310
Helix 56	AG2	I	261	264	Right-handed 310
Helix 57	AG3	I	268	277	Right-handed alpha
Helix 58	AG4	I	293	297	Right-handed alpha
Helix 59	AG5	I	303	315	Right-handed alpha
Helix 60	AG6	I	316	318	Right-handed 310
Helix 61	AG7	I	322	333	Right-handed alpha
Helix 62	AG8	I	340	352	Right-handed alpha

There are 16 sheets in PDB entry 7R6V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	80	85	anti-parallel
Strand 3	D	90	98	anti-parallel
Strand 4	D	191	199	anti-parallel
Strand 5	D	227	235	anti-parallel
Strand 6	D	244	252	anti-parallel
Strand 7	D	266	267	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	80	85	anti-parallel
Strand 3	D	90	98	anti-parallel
Strand 4	D	191	199	anti-parallel
Strand 5	D	227	235	anti-parallel
Strand 6	D	244	252	anti-parallel
Strand 7	D	290	292	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	140	first strand
Strand 2	D	163	166	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	204	first strand
Strand 2	D	210	217	anti-parallel
Strand 3	E	210	217	anti-parallel
Strand 4	E	203	204	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	222	223	first strand
Strand 2	D	210	217	anti-parallel
Strand 3	E	210	217	anti-parallel
Strand 4	E	222	223	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	76	first strand
Strand 2	E	80	85	anti-parallel
Strand 3	E	90	98	anti-parallel
Strand 4	E	191	199	anti-parallel
Strand 5	E	227	235	anti-parallel
Strand 6	E	244	252	anti-parallel
Strand 7	E	266	267	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	76	first strand
Strand 2	E	80	85	anti-parallel
Strand 3	E	90	98	anti-parallel
Strand 4	E	191	199	anti-parallel
Strand 5	E	227	235	anti-parallel
Strand 6	E	244	252	anti-parallel
Strand 7	E	290	292	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	137	140	first strand
Strand 2	E	163	166	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	76	first strand
Strand 2	G	80	85	anti-parallel
Strand 3	G	90	98	anti-parallel
Strand 4	G	191	199	anti-parallel
Strand 5	G	227	235	anti-parallel
Strand 6	G	244	252	anti-parallel
Strand 7	G	266	267	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	75	76	first strand
Strand 2	G	80	85	anti-parallel
Strand 3	G	90	98	anti-parallel
Strand 4	G	191	199	anti-parallel
Strand 5	G	227	235	anti-parallel
Strand 6	G	244	252	anti-parallel
Strand 7	G	290	292	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	137	140	first strand
Strand 2	G	163	166	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	202	204	first strand
Strand 2	G	210	217	anti-parallel
Strand 3	I	210	217	anti-parallel
Strand 4	I	202	204	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	222	223	first strand
Strand 2	G	210	217	anti-parallel
Strand 3	I	210	217	anti-parallel
Strand 4	I	222	223	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	76	first strand
Strand 2	I	80	85	anti-parallel
Strand 3	I	90	98	anti-parallel
Strand 4	I	191	199	anti-parallel
Strand 5	I	227	235	anti-parallel
Strand 6	I	245	252	anti-parallel
Strand 7	I	266	267	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	76	first strand
Strand 2	I	80	85	anti-parallel
Strand 3	I	90	98	anti-parallel
Strand 4	I	191	199	anti-parallel
Strand 5	I	227	235	anti-parallel
Strand 6	I	245	252	anti-parallel
Strand 7	I	291	292	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	137	140	first strand
Strand 2	I	163	166	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R6V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R6V