Analysis of interatomic Contacts of Structural Units in PDB entry:
7R71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R71 entry

There are 3 chains in PDB entry 7R71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -3GLN 341
D
 ILE 3GLY 76
C
 SER 0MET 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7R71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
260 265Right-handed alpha
Helix 3
AA3
A
318 326Right-handed alpha
Helix 4
AA4
D
22 35Right-handed alpha
Helix 5
AA5
D
37 39Right-handed 310
Helix 6
AA6
D
56 60Right-handed 310
Helix 7
AA7
C
2 16Right-handed alpha
Helix 8
AA8
C
86 90Right-handed 310
Helix 9
AA9
C
98 112Right-handed alpha
Helix 10
AB1
C
120 130Right-handed alpha
Helix 11
AB2
C
130 146Right-handed alpha
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There are 4 sheets in PDB entry 7R71. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 17first strand
Strand 2
A
1 6anti-parallel
Strand 3
A
66 71parallel
Strand 4
A
41 45anti-parallel
Strand 5
A
48 49anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
306 309anti-parallel
Strand 3
A
315 317anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 14first strand
Strand 2
D
4 6anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 50anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 26first strand
Strand 2
C
29 38anti-parallel
Strand 3
C
49 55anti-parallel
Strand 4
C
66 69anti-parallel
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