Analysis of interatomic Contacts of Structural Units in PDB entry:
7R7U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R7U entry

There are 6 chains in PDB entry 7R7U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 199	GLN 764
B	ASN 199	GLN 764
C	ASN 199	GLN 764
D	ASN 199	GLN 764
E	ASN 199	GLN 764
F	ASN 199	GLN 764

There are157 helices in PDB entry 7R7U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	202	206	Right-handed 310
Helix 2	AA2	A	209	221	Right-handed alpha
Helix 3	AA3	A	226	228	Right-handed 310
Helix 4	AA4	A	229	234	Right-handed alpha
Helix 5	AA5	A	250	263	Right-handed alpha
Helix 6	AA6	A	271	276	Right-handed alpha
Helix 7	AA7	A	286	295	Right-handed alpha
Helix 8	AA8	A	305	310	Right-handed alpha
Helix 9	AA9	A	312	316	Right-handed 310
Helix 10	AB1	A	319	335	Right-handed alpha
Helix 11	AB2	A	373	385	Right-handed alpha
Helix 12	AB3	A	396	401	Right-handed alpha
Helix 13	AB4	A	407	426	Right-handed alpha
Helix 14	AB5	A	440	444	Right-handed alpha
Helix 15	AB6	A	448	458	Right-handed alpha
Helix 16	AB7	A	482	499	Right-handed alpha
Helix 17	AB8	A	522	535	Right-handed alpha
Helix 18	AB9	A	543	552	Right-handed alpha
Helix 19	AC1	A	555	557	Right-handed 310
Helix 20	AC2	A	558	569	Right-handed alpha
Helix 21	AC3	A	579	585	Right-handed alpha
Helix 22	AC4	A	600	608	Right-handed alpha
Helix 23	AC5	A	649	662	Right-handed alpha
Helix 24	AC6	A	671	679	Right-handed alpha
Helix 25	AC7	A	684	702	Right-handed alpha
Helix 26	AC8	A	703	712	Right-handed alpha
Helix 27	AC9	A	732	740	Right-handed alpha
Helix 28	AD1	A	748	757	Right-handed alpha
Helix 29	AD2	A	758	760	Right-handed 310
Helix 30	AD3	B	209	221	Right-handed alpha
Helix 31	AD4	B	229	234	Right-handed alpha
Helix 32	AD5	B	250	263	Right-handed alpha
Helix 33	AD6	B	272	277	Right-handed alpha
Helix 34	AD7	B	286	296	Right-handed alpha
Helix 35	AD8	B	305	310	Right-handed alpha
Helix 36	AD9	B	319	335	Right-handed alpha
Helix 37	AE1	B	373	385	Right-handed alpha
Helix 38	AE2	B	396	403	Right-handed alpha
Helix 39	AE3	B	407	426	Right-handed alpha
Helix 40	AE4	B	448	458	Right-handed alpha
Helix 41	AE5	B	483	499	Right-handed alpha
Helix 42	AE6	B	500	505	Right-handed alpha
Helix 43	AE7	B	522	535	Right-handed alpha
Helix 44	AE8	B	543	552	Right-handed alpha
Helix 45	AE9	B	555	557	Right-handed 310
Helix 46	AF1	B	558	569	Right-handed alpha
Helix 47	AF2	B	579	588	Right-handed alpha
Helix 48	AF3	B	600	610	Right-handed alpha
Helix 49	AF4	B	649	660	Right-handed alpha
Helix 50	AF5	B	671	679	Right-handed alpha
Helix 51	AF6	B	683	712	Right-handed alpha
Helix 52	AF7	B	732	742	Right-handed alpha
Helix 53	AF8	B	748	756	Right-handed alpha
Helix 54	AF9	B	757	761	Right-handed 310
Helix 55	AG1	C	209	221	Right-handed alpha
Helix 56	AG2	C	229	234	Right-handed alpha
Helix 57	AG3	C	250	262	Right-handed alpha
Helix 58	AG4	C	272	277	Right-handed alpha
Helix 59	AG5	C	280	284	Right-handed 310
Helix 60	AG6	C	286	296	Right-handed alpha
Helix 61	AG7	C	318	335	Right-handed alpha
Helix 62	AG8	C	373	387	Right-handed alpha
Helix 63	AG9	C	397	403	Right-handed alpha
Helix 64	AH1	C	407	426	Right-handed alpha
Helix 65	AH2	C	448	459	Right-handed alpha
Helix 66	AH3	C	482	495	Right-handed alpha
Helix 67	AH4	C	501	506	Right-handed alpha
Helix 68	AH5	C	522	536	Right-handed alpha
Helix 69	AH6	C	543	549	Right-handed alpha
Helix 70	AH7	C	557	569	Right-handed alpha
Helix 71	AH8	C	579	585	Right-handed alpha
Helix 72	AH9	C	600	609	Right-handed alpha
Helix 73	AI1	C	649	661	Right-handed alpha
Helix 74	AI2	C	671	679	Right-handed alpha
Helix 75	AI3	C	684	703	Right-handed alpha
Helix 76	AI4	C	703	713	Right-handed alpha
Helix 77	AI5	C	732	741	Right-handed alpha
Helix 78	AI6	C	748	757	Right-handed alpha
Helix 79	AI7	D	209	221	Right-handed alpha
Helix 80	AI8	D	228	233	Right-handed alpha
Helix 81	AI9	D	250	263	Right-handed alpha
Helix 82	AJ1	D	286	296	Right-handed alpha
Helix 83	AJ2	D	305	310	Right-handed alpha
Helix 84	AJ3	D	319	334	Right-handed alpha
Helix 85	AJ4	D	335	336	Right-handed 310
Helix 86	AJ5	D	337	341	Right-handed 310
Helix 87	AJ6	D	373	385	Right-handed alpha
Helix 88	AJ7	D	407	426	Right-handed alpha
Helix 89	AJ8	D	440	444	Right-handed alpha
Helix 90	AJ9	D	448	458	Right-handed alpha
Helix 91	AK1	D	482	499	Right-handed alpha
Helix 92	AK2	D	501	506	Right-handed alpha
Helix 93	AK3	D	522	536	Right-handed alpha
Helix 94	AK4	D	543	552	Right-handed alpha
Helix 95	AK5	D	557	569	Right-handed alpha
Helix 96	AK6	D	580	588	Right-handed alpha
Helix 97	AK7	D	600	611	Right-handed alpha
Helix 98	AK8	D	649	662	Right-handed alpha
Helix 99	AK9	D	671	679	Right-handed alpha
Helix 100	AL1	D	683	713	Right-handed alpha
Helix 101	AL2	D	732	740	Right-handed alpha
Helix 102	AL3	D	748	757	Right-handed alpha
Helix 103	AL4	D	758	761	Right-handed 310
Helix 104	AL5	E	209	220	Right-handed alpha
Helix 105	AL6	E	229	234	Right-handed alpha
Helix 106	AL7	E	250	263	Right-handed alpha
Helix 107	AL8	E	271	277	Right-handed alpha
Helix 108	AL9	E	286	295	Right-handed alpha
Helix 109	AM1	E	305	310	Right-handed alpha
Helix 110	AM2	E	312	316	Right-handed 310
Helix 111	AM3	E	318	335	Right-handed alpha
Helix 112	AM4	E	373	387	Right-handed alpha
Helix 113	AM5	E	396	403	Right-handed alpha
Helix 114	AM6	E	407	426	Right-handed alpha
Helix 115	AM7	E	448	457	Right-handed alpha
Helix 116	AM8	E	482	499	Right-handed alpha
Helix 117	AM9	E	499	506	Right-handed alpha
Helix 118	AN1	E	522	536	Right-handed alpha
Helix 119	AN2	E	543	552	Right-handed alpha
Helix 120	AN3	E	556	569	Right-handed alpha
Helix 121	AN4	E	579	588	Right-handed alpha
Helix 122	AN5	E	600	608	Right-handed alpha
Helix 123	AN6	E	649	661	Right-handed alpha
Helix 124	AN7	E	671	679	Right-handed alpha
Helix 125	AN8	E	684	703	Right-handed alpha
Helix 126	AN9	E	703	713	Right-handed alpha
Helix 127	AO1	E	732	740	Right-handed alpha
Helix 128	AO2	E	741	743	Right-handed 310
Helix 129	AO3	E	748	756	Right-handed alpha
Helix 130	AO4	E	757	761	Right-handed 310
Helix 131	AO5	F	209	221	Right-handed alpha
Helix 132	AO6	F	229	234	Right-handed alpha
Helix 133	AO7	F	250	263	Right-handed alpha
Helix 134	AO8	F	271	277	Right-handed alpha
Helix 135	AO9	F	286	296	Right-handed alpha
Helix 136	AP1	F	305	310	Right-handed alpha
Helix 137	AP2	F	312	316	Right-handed 310
Helix 138	AP3	F	319	335	Right-handed alpha
Helix 139	AP4	F	349	353	Right-handed 310
Helix 140	AP5	F	373	385	Right-handed alpha
Helix 141	AP6	F	396	403	Right-handed alpha
Helix 142	AP7	F	407	426	Right-handed alpha
Helix 143	AP8	F	448	459	Right-handed alpha
Helix 144	AP9	F	482	499	Right-handed alpha
Helix 145	AQ1	F	501	506	Right-handed alpha
Helix 146	AQ2	F	522	536	Right-handed alpha
Helix 147	AQ3	F	543	552	Right-handed alpha
Helix 148	AQ4	F	556	569	Right-handed alpha
Helix 149	AQ5	F	580	588	Right-handed alpha
Helix 150	AQ6	F	600	610	Right-handed alpha
Helix 151	AQ7	F	631	635	Right-handed 310
Helix 152	AQ8	F	649	661	Right-handed alpha
Helix 153	AQ9	F	671	679	Right-handed alpha
Helix 154	AR1	F	683	713	Right-handed alpha
Helix 155	AR2	F	732	743	Right-handed alpha
Helix 156	AR3	F	748	756	Right-handed alpha
Helix 157	AR4	F	757	761	Right-handed 310

There are 14 sheets in PDB entry 7R7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	270	first strand
Strand 2	A	300	304	parallel
Strand 3	A	342	346	parallel
Strand 4	A	240	243	parallel
Strand 5	A	365	366	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	542	first strand
Strand 2	A	572	576	parallel
Strand 3	A	619	623	parallel
Strand 4	A	513	517	parallel
Strand 5	A	642	644	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	269	first strand
Strand 2	B	300	303	parallel
Strand 3	B	342	345	parallel
Strand 4	B	240	242	parallel
Strand 5	B	365	366	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	618	623	parallel
Strand 4	B	513	517	parallel
Strand 5	B	642	644	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	269	first strand
Strand 2	C	300	303	parallel
Strand 3	C	342	347	parallel
Strand 4	C	241	244	parallel
Strand 5	C	365	366	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	514	first strand
Strand 2	C	618	621	parallel
Strand 3	C	572	576	parallel
Strand 4	C	538	542	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	268	269	first strand
Strand 2	D	300	303	parallel
Strand 3	D	342	346	parallel
Strand 4	D	240	243	parallel
Strand 5	D	365	366	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	517	first strand
Strand 2	D	617	623	parallel
Strand 3	D	572	576	parallel
Strand 4	D	538	542	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	241	242	first strand
Strand 2	E	365	366	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	300	303	first strand
Strand 2	E	342	345	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	538	542	first strand
Strand 2	E	572	577	parallel
Strand 3	E	619	622	parallel
Strand 4	E	515	517	parallel
Strand 5	E	642	644	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	241	242	first strand
Strand 2	F	365	366	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	268	270	first strand
Strand 2	F	300	304	parallel
Strand 3	F	342	344	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	513	517	first strand
Strand 2	F	617	623	parallel
Strand 3	F	572	576	parallel
Strand 4	F	538	542	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R7U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R7U