Analysis of interatomic Contacts of Structural Units in PDB entry:
7R8M

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7R8M entry

There are 7 chains in PDB entry 7R8M (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 27	ASP 1146
B	ALA 27	ASP 1146
C	ALA 27	ASP 1146
D	GLU 1	SER 115
E	VAL 3	LEU 106
H	GLU 1	SER 115
L	VAL 3	LEU 106

There are 67 helices in PDB entry 7R8M. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	364	371	Right-handed alpha
Helix 3	AA3	A	383	387	Right-handed 310
Helix 4	AA4	A	415	419	Right-handed 310
Helix 5	AA5	A	737	743	Right-handed alpha
Helix 6	AA6	A	747	756	Right-handed alpha
Helix 7	AA7	A	758	782	Right-handed alpha
Helix 8	AA8	A	816	826	Right-handed alpha
Helix 9	AA9	A	866	884	Right-handed alpha
Helix 10	AB1	A	886	891	Right-handed alpha
Helix 11	AB2	A	897	908	Right-handed alpha
Helix 12	AB3	A	913	940	Right-handed alpha
Helix 13	AB4	A	945	967	Right-handed alpha
Helix 14	AB5	A	971	975	Right-handed 310
Helix 15	AB6	A	985	1029	Right-handed alpha
Helix 16	AB7	A	1116	1118	Right-handed 310
Helix 17	AB8	A	1140	1146	Right-handed alpha
Helix 18	AB9	B	294	304	Right-handed alpha
Helix 19	AC1	B	349	353	Right-handed 310
Helix 20	AC2	B	365	371	Right-handed alpha
Helix 21	AC3	B	384	388	Right-handed 310
Helix 22	AC4	B	404	410	Right-handed 310
Helix 23	AC5	B	417	422	Right-handed alpha
Helix 24	AC6	B	738	743	Right-handed alpha
Helix 25	AC7	B	746	754	Right-handed alpha
Helix 26	AC8	B	758	782	Right-handed alpha
Helix 27	AC9	B	811	815	Right-handed 310
Helix 28	AD1	B	816	825	Right-handed alpha
Helix 29	AD2	B	866	884	Right-handed alpha
Helix 30	AD3	B	886	890	Right-handed 310
Helix 31	AD4	B	897	908	Right-handed alpha
Helix 32	AD5	B	913	918	Right-handed alpha
Helix 33	AD6	B	919	939	Right-handed alpha
Helix 34	AD7	B	941	945	Right-handed 310
Helix 35	AD8	B	946	967	Right-handed alpha
Helix 36	AD9	B	976	984	Right-handed alpha
Helix 37	AE1	B	985	1032	Right-handed alpha
Helix 38	AE2	B	1116	1118	Right-handed 310
Helix 39	AE3	B	1140	1146	Right-handed alpha
Helix 40	AE4	C	294	303	Right-handed alpha
Helix 41	AE5	C	337	341	Right-handed 310
Helix 42	AE6	C	349	353	Right-handed 310
Helix 43	AE7	C	365	371	Right-handed alpha
Helix 44	AE8	C	385	389	Right-handed 310
Helix 45	AE9	C	406	410	Right-handed 310
Helix 46	AF1	C	416	422	Right-handed alpha
Helix 47	AF2	C	568	572	Right-handed 310
Helix 48	AF3	C	737	742	Right-handed alpha
Helix 49	AF4	C	746	755	Right-handed alpha
Helix 50	AF5	C	758	783	Right-handed alpha
Helix 51	AF6	C	816	827	Right-handed alpha
Helix 52	AF7	C	866	884	Right-handed alpha
Helix 53	AF8	C	886	890	Right-handed 310
Helix 54	AF9	C	897	908	Right-handed alpha
Helix 55	AG1	C	913	918	Right-handed alpha
Helix 56	AG2	C	919	941	Right-handed alpha
Helix 57	AG3	C	945	965	Right-handed alpha
Helix 58	AG4	C	966	968	Right-handed 310
Helix 59	AG5	C	985	1032	Right-handed alpha
Helix 60	AG6	C	1116	1118	Right-handed 310
Helix 61	AG7	C	1141	1146	Right-handed alpha
Helix 62	AG8	D	28	32	Right-handed 310
Helix 63	AG9	D	83	87	Right-handed 310
Helix 64	AH1	E	79	83	Right-handed 310
Helix 65	AH2	H	28	32	Right-handed 310
Helix 66	AH3	H	60	64	Right-handed 310
Helix 67	AH4	H	83	87	Right-handed 310

There are 55 sheets in PDB entry 7R8M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	51	first strand
Strand 2	A	275	279	anti-parallel
Strand 3	A	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	103	106	anti-parallel
Strand 4	A	117	120	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	166	172	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	94	first strand
Strand 2	A	189	195	anti-parallel
Strand 3	A	207	208	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	94	first strand
Strand 2	A	189	195	anti-parallel
Strand 3	A	202	204	anti-parallel
Strand 4	A	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	317	first strand
Strand 2	A	594	599	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	649	651	anti-parallel
Strand 5	A	643	644	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	539	543	parallel
Strand 3	A	546	555	anti-parallel
Strand 4	A	583	588	anti-parallel
Strand 5	A	575	578	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	394	401	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	432	437	anti-parallel
Strand 5	A	376	379	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	566	first strand
Strand 2	B	42	43	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	671	first strand
Strand 2	A	695	696	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	712	first strand
Strand 2	A	1075	1076	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	722	first strand
Strand 2	A	1065	1069	anti-parallel
Strand 3	A	1047	1048	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	725	727	first strand
Strand 2	A	1059	1062	anti-parallel
Strand 3	A	1053	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	734	first strand
Strand 2	A	860	861	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1125	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1094	1097	first strand
Strand 2	A	1102	1105	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	B	265	269	anti-parallel
Strand 4	B	90	95	anti-parallel
Strand 5	B	189	191	anti-parallel
Strand 6	B	207	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	104	107	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	126	131	anti-parallel
Strand 3	B	166	168	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	126	131	anti-parallel
Strand 3	B	171	172	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	194	197	first strand
Strand 2	B	200	204	anti-parallel
Strand 3	B	225	229	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	318	first strand
Strand 2	B	593	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	644	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	539	543	parallel
Strand 3	B	546	552	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	575	577	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	395	399	anti-parallel
Strand 3	B	511	514	anti-parallel
Strand 4	B	431	435	anti-parallel
Strand 5	B	376	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	362	first strand
Strand 2	B	524	525	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	454	first strand
Strand 2	B	492	493	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	665	667	first strand
Strand 2	B	670	671	anti-parallel
Strand 3	B	695	696	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	727	first strand
Strand 2	B	1060	1076	anti-parallel
Strand 3	B	1047	1054	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1121	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1096	first strand
Strand 2	B	1103	1105	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	60	61	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	55	first strand
Strand 2	C	271	278	anti-parallel
Strand 3	C	287	290	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	229	first strand
Strand 2	C	200	207	anti-parallel
Strand 3	C	190	197	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	265	267	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	125	126	anti-parallel
Strand 3	C	170	171	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	650	651	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	327	first strand
Strand 2	C	539	542	parallel
Strand 3	C	548	553	anti-parallel
Strand 4	C	586	588	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	394	403	anti-parallel
Strand 3	C	507	516	anti-parallel
Strand 4	C	431	434	anti-parallel
Strand 5	C	377	380	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	665	667	first strand
Strand 2	C	670	671	anti-parallel
Strand 3	C	695	696	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	712	first strand
Strand 2	C	1075	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	727	first strand
Strand 2	C	1060	1069	anti-parallel
Strand 3	C	1047	1050	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1081	1083	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1120	1121	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	5	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	77	82	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	107	111	parallel
Strand 3	D	88	91	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	57	59	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	95	first strand
Strand 2	D	100	102	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	13	first strand
Strand 2	E	102	106	parallel
Strand 3	E	84	86	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	24	first strand
Strand 2	E	70	75	anti-parallel
Strand 3	E	62	67	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	38	first strand
Strand 2	E	44	48	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	90	first strand
Strand 2	E	97	98	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	96	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	57	58	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	96	anti-parallel
Strand 4	H	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	23	first strand
Strand 2	H	77	81	anti-parallel
Strand 3	H	68	72	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	13	first strand
Strand 2	L	103	106	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	65	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	44	49	first strand
Strand 2	L	33	38	anti-parallel
Strand 3	L	85	90	anti-parallel
Strand 4	L	97	98	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7R8M

Analysis of interatomic Contacts of Structural Units in PDB entry:
7R8M