Analysis of interatomic Contacts of Structural Units in PDB entry:
7R8Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R8Z entry

There are 3 chains in PDB entry 7R8Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 34
A
 SER 36GLY 169
A
 GLY 171GLY 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7R8Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 30Right-handed alpha
Helix 2
AA2
A
56 71Right-handed alpha
Helix 3
AA3
A
83 98Right-handed alpha
Helix 4
AA4
A
118 129Right-handed alpha
Helix 5
AA5
A
130 133Right-handed 310
Helix 6
AA6
A
139 148Right-handed alpha
Helix 7
AA7
A
154 169Right-handed alpha
Helix 8
AA8
A
215 223Right-handed alpha
Helix 9
AA9
A
224 226Right-handed 310
Helix 10
AB1
A
228 242Right-handed alpha
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There are 2 sheets in PDB entry 7R8Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 41first strand
Strand 2
A
5 12parallel
Strand 3
A
75 78parallel
Strand 4
A
101 104parallel
Strand 5
A
135 136parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
187 191anti-parallel
Strand 3
A
194 198anti-parallel
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