Analysis of interatomic Contacts of Structural Units in PDB entry:
7R97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R97 entry

There are 4 chains in PDB entry 7R97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 226
B
 MET 1GLU 226
C
 A 1 U 28
D
 A 1 U 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7R97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
19 27Right-handed alpha
Helix 3
AA3
A
37 60Right-handed alpha
Helix 4
AA4
A
64 77Right-handed alpha
Helix 5
AA5
A
77 88Right-handed alpha
Helix 6
AA6
A
89 94Right-handed 310
Helix 7
AA7
A
97 102Right-handed alpha
Helix 8
AA8
A
104 107Right-handed 310
Helix 9
AA9
A
108 127Right-handed alpha
Helix 10
AB1
A
128 140Right-handed alpha
Helix 11
AB2
A
140 147Right-handed alpha
Helix 12
AB3
A
150 154Right-handed 310
Helix 13
AB4
A
155 167Right-handed alpha
Helix 14
AB5
A
207 223Right-handed alpha
Helix 15
AB6
B
2 14Right-handed alpha
Helix 16
AB7
B
19 28Right-handed alpha
Helix 17
AB8
B
37 60Right-handed alpha
Helix 18
AB9
B
64 77Right-handed alpha
Helix 19
AC1
B
77 88Right-handed alpha
Helix 20
AC2
B
89 93Right-handed 310
Helix 21
AC3
B
97 102Right-handed alpha
Helix 22
AC4
B
103 107Right-handed 310
Helix 23
AC5
B
108 127Right-handed alpha
Helix 24
AC6
B
128 140Right-handed alpha
Helix 25
AC7
B
140 147Right-handed alpha
Helix 26
AC8
B
150 154Right-handed 310
Helix 27
AC9
B
155 167Right-handed alpha
Helix 28
AD1
B
207 223Right-handed alpha
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There are 2 sheets in PDB entry 7R97. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 182first strand
Strand 2
A
185 193anti-parallel
Strand 3
A
201 205anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 182first strand
Strand 2
B
185 193anti-parallel
Strand 3
B
201 205anti-parallel
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