Analysis of interatomic Contacts of Structural Units in PDB entry:
7R9B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7R9B entry

There is 1 chain in PDB entry 7R9B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7R9B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 30Right-handed alpha
Helix 2
AA2
A
31 40Right-handed alpha
Helix 3
AA3
A
50 52Right-handed 310
Helix 4
AA4
A
53 60Right-handed alpha
Helix 5
AA5
A
86 94Right-handed alpha
Helix 6
AA6
A
101 109Right-handed alpha
Helix 7
AA7
A
111 125Right-handed alpha
Helix 8
AA8
A
151 155Right-handed 310
Helix 9
AA9
A
162 172Right-handed alpha
Helix 10
AB1
A
192 197Right-handed alpha
Helix 11
AB2
A
207 211Right-handed 310
Helix 12
AB3
A
212 222Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7R9B.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
43 48parallel
Strand 3
A
2 7parallel
Strand 4
A
203 206parallel
Strand 5
A
180 184parallel
Strand 6
A
146 149parallel
Strand 7
A
128 133parallel
Strand 8
A
96 99parallel
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